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SR2-18-Sp2_coassembly_scaffold_404745

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-Sp2_coassembly_scaffold_404745_1
RHI_OP11_Daviesbacteria_37_11, Daviesbacteria, Microgenomates, Bacteria

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149..457
DNA (309bp) protein (103aa)
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_11_curated
SR2-18-Sp2_coassembly_scaffold_404745_2
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

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498..749
DNA (252bp) protein (84aa)
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein {ECO:0000313|EMBL:KKS32403.1}; TaxID=1618356 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_42_12.;"
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein id=4148088 bin=GWF2_Lentisphaerae_50_93 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
putative helix-turn-helix protein CopG
SR2-18-Sp2_coassembly_scaffold_404745_3
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

Not on your lists

730..1134
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AUC1_9BACT
Toxin-antitoxin system toxin component, PIN family {ECO:0000313|EMBL:KKS32402.1}; TaxID=1618356 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_42_12.;"
hypothetical protein
SR2-18-Sp2_coassembly_scaffold_404745_4
GWB1_OP11_47_26, Amesbacteria, Microgenomates, Bacteria

Not on your lists

1299..1691
DNA (393bp) protein (131aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU74242.1}; TaxID=1618361 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWB1_47_26.;"
hypothetical protein id=15190988 bin=GWC1_OP11_49_16_COMPLETE species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
SR2-18-Sp2_coassembly_scaffold_404745_5
GWA1_OD1_44_9_plus, Azambacteria, Parcubacteria, Bacteria

Not on your lists

1688..4030
DNA (2343bp) protein (781aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT81267.1}; TaxID=1618610 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWA1_44_9.;"
hypothetical protein id=15190989 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
hypothetical protein
SR2-18-Sp2_coassembly_scaffold_404745_6
unknown

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comp(4110..4316)
DNA (207bp) protein (69aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_404745_7
GWA2_OD1_50_22_partial, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4318..5724)
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI0003713A43
TnpB family transposase {ECO:0000313|EMBL:KKW17197.1}; TaxID=1619043 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_50_22.;"
transposase
SR2-18-Sp2_coassembly_scaffold_404745_8
R_OP11_Gottesmanbacteria_42_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

6212..6736
DNA (525bp) protein (175aa)
protein of unknown function DUF497; K09803 hypothetical protein id=41711 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Gottesmanbacteria_42_12_curated
SR2-18-Sp2_coassembly_scaffold_404745_9
GWA1_OP11_47_20, Amesbacteria, Microgenomates, Bacteria

Not on your lists

6862..7170
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AKW2_9BACT
Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:KKU66587.1}; TaxID=1618354 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA1_47_20.;"
methylated-DNA--protein-cysteine methyltransferase
SR2-18-Sp2_coassembly_scaffold_404745_10
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

Not on your lists


7274..8389
DNA (1116bp) protein (372aa)
30S ribosomal protein S1 n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVD5_9BACT id=51310 bin=ACD40 species=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD40 organism_group=OP11 (Microgenomates) organism_desc=OP11
30S ribosomal protein S1 {ECO:0000313|EMBL:KKS32121.1}; TaxID=1618356 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_42_12.;"
30S ribosomal protein S1
SR2-18-Sp2_coassembly_scaffold_404745_11
R_OP11_Daviesbacteria_41_45, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

8405..8626
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GLG6_CALEA
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_41_45_curated
SR2-18-Sp2_coassembly_scaffold_404745_12
RIFOXYB1_FULL_OP11_Amesbacteria_44_23_curated, Amesbacteria, Microgenomates, Bacteria

Not on your lists

9011..10303
DNA (1293bp) protein (431aa)
DNA repair protein radA n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PU30_CLOSD id=5086970 bin=GWF1_OP11_31_35_complete species=[Clostridium] sticklandii genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
radA; DNA repair protein RadA
Tax=RIFOXYB1_FULL_OP11_Amesbacteria_44_23_curated
SR2-18-Sp2_coassembly_scaffold_404745_13
GWA2_OP11_47_11b, Amesbacteria, Microgenomates, Bacteria

Not on your lists

10816..11721
DNA (906bp) protein (302aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SH23_GEOOG
Uncharacterized protein {ECO:0000313|EMBL:KKU57227.1}; TaxID=1618358 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_47_11b.;"
EmrB/QacA subfamily drug resistance transporter
SR2-18-Sp2_coassembly_scaffold_404745_14
R_OP11_Woesebacteria_39_10, Woesebacteria, Microgenomates, Bacteria

Not on your lists

11761..12006
DNA (246bp) protein (82aa)
Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_10_curated
SR2-18-Sp2_coassembly_scaffold_404745_15
R_OP11_Gottesmanbacteria_40_13, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

12003..12395
DNA (393bp) protein (131aa)
twitching motility protein PilT n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B3F5F4
PilT protein domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Gottesmanbacteria_40_13_curated
SR2-18-Sp2_coassembly_scaffold_404745_16
GWA2_OP11_47_11b, Amesbacteria, Microgenomates, Bacteria

Not on your lists

12399..12998
DNA (600bp) protein (200aa)
Sortase family protein n=2 Tax=Clostridium perfringens RepID=G5DSB5_CLOPF id=5086596 bin=GWF1_OP11_31_35_complete species=Clostridium perfringens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
YhcS protein {ECO:0000313|EMBL:KKU57228.1}; TaxID=1618358 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_47_11b.;"
sortase family protein
SR2-18-Sp2_coassembly_scaffold_404745_17
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

Not on your lists

13077..14354
DNA (1278bp) protein (426aa)
Transcription termination factor Rho {ECO:0000313|EMBL:KKS32447.1}; TaxID=1618356 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_42_12.;"
cag:Cagg_3627 rho; transcription termination factor Rho; K03628 transcription termination factor Rho id=75454 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
rho; transcription termination factor Rho
SR2-18-Sp2_coassembly_scaffold_404745_18
Microgenomates bacterium GW2011_GWB1_44_8, Microgenomates, Bacteria

Not on your lists

14397..14750
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DI31_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKT76803.1}; TaxID=1618505 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWB1_44_8.;"
SR2-18-Sp2_coassembly_scaffold_404745_19
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

14758..15498
DNA (741bp) protein (247aa)
Methyltransferase type 11 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TYG7_9CHLR
Methyltransferase type 11 {ECO:0000313|EMBL:EFH83247.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
type 11 methyltransferase
SR2-18-Sp2_coassembly_scaffold_404745_20
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

Not on your lists

15506..16198
DNA (693bp) protein (231aa)
Hydrolase, alpha/beta protein n=1 Tax=uncultured bacterium RepID=K1YBX3_9BACT
Carboxylic ester hydrolase {ECO:0000313|EMBL:KKS32444.1}; TaxID=1618356 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_42_12.;"
alpha/beta hydrolase fold protein
SR2-18-Sp2_coassembly_scaffold_404745_21
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

Not on your lists

16141..17355
DNA (1215bp) protein (405aa)
UDP-N-acetylmuramyl pentapeptide synthase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=uncultured bacterium RepID=K1XQM2_9BACT
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase {ECO:0000313|EMBL:KKS32443.1}; TaxID=1618356 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_42_12.;"
SR2-18-Sp2_coassembly_scaffold_404745_22
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(17482..18084)
DNA (603bp) protein (201aa)
Tax=RBG_16_WWE3_37_10_curated
SR2-18-Sp2_coassembly_scaffold_404745_23
GWA2_OP11_47_11b, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(18097..18483)
DNA (387bp) protein (129aa)
PilT protein domain protein n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZAD2_ANACC
Putative ribonuclease VapC {ECO:0000313|EMBL:KKU57232.1}; TaxID=1618358 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_47_11b.;"
PilT protein domain protein
SR2-18-Sp2_coassembly_scaffold_404745_24
GWA2_OP11_47_11b, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(18470..18712)
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU57233.1}; TaxID=1618358 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_47_11b.;"
SR2-18-Sp2_coassembly_scaffold_404745_25
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(18756..19835)
DNA (1080bp) protein (360aa)
ddl; D-alanine-D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Peptoniphilus sp. oral taxon 386 str. F0131 RepID=D7N7U6_9FIRM
D-alanine-D-alanine ligase {ECO:0000313|EMBL:KKS32442.1}; TaxID=1618356 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_42_12.;"
SR2-18-Sp2_coassembly_scaffold_404745_26
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(19832..20668)
DNA (837bp) protein (279aa)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Acinetobacter junii CIP 64.5 RepID=N9C917_ACIJU
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000313|EMBL:KKS32431.1}; TaxID=1618356 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_42_12.;"
SR2-18-Sp2_coassembly_scaffold_404745_27
RHI_WWE3_38_15, WWE3, Bacteria

Not on your lists

20687..21991
DNA (1305bp) protein (435aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=uncultured bacterium RepID=K2EAG6_9BACT
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
Tax=RIFCSPHIGHO2_12_FULL_WWE3_38_15_curated
SR2-18-Sp2_coassembly_scaffold_404745_28
R_OP11_Amesbacteria_48_32, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(21988..23172)
DNA (1185bp) protein (395aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035ED7B2
Tax=RIFCSPHIGHO2_01_FULL_OP11_Amesbacteria_48_32_curated
SR2-18-Sp2_coassembly_scaffold_404745_29
GWA1_OP11_44_24, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(23162..24391)
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037F78D5
Uncharacterized protein {ECO:0000313|EMBL:KKT57937.1}; TaxID=1618351 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA1_44_24.;"
hypothetical protein
SR2-18-Sp2_coassembly_scaffold_404745_30
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(24388..25581)
DNA (1194bp) protein (398aa)
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Eggerthia catenaformis OT 569 = DSM 20559 RepID=M2PZJ0_9FIRM id=5087374 bin=GWF1_OP11_31_35_complete species=Eggerthia catenaformis genus=Eggerthia taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
UDP-N-acetylmuramate-L-alanine ligase {ECO:0000313|EMBL:KKS32434.1}; TaxID=1618356 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_42_12.;"
Displaying items 1-30 of 38 in total

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