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ACD50_108

Alias: ACD50_49696.4869.8

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD50_108_1
GWC2_OP11_41_21, Curtissbacteria, Microgenomates, Bacteria

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61..615
DNA (555bp) protein (185aa)
LemA family protein
LemA-like protein n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B255F (db=UNIREF evalue=2.0e-51 bit_score=204.0 identity=61.64 coverage=85.4054054054054)
seg (db=Seg db_id=seg from=164 to=184)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
ACD50_108_2
RIFOXYC2_FULL_OP11_Curtissbacteria_41_11_curated, Curtissbacteria, Microgenomates, Bacteria

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623..1528
DNA (906bp) protein (302aa)
ribose-phosphate pyrophosphokinase
RIBOSE-PHOSPHATE PYROPHOSPHOKINASE (db=HMMPanther db_id=PTHR10210 from=1 to=293 evalue=1.4e-98)
RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 1,2,3,4 (db=HMMPanther db_id=PTHR10210:SF14 from=1 to=293 evalue=1.4e-98)
ribP_PPkin: ribose-phosphate diphosphokina (db=HMMTigr db_id=TIGR01251 from=4 to=300 evalue=9.4e-95 interpro_id=IPR005946 interpro_description=Phosphoribosyl pyrophosphokinase GO=Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: ribose phosphate diphosphokinase activity (GO:0004749), Biological Process: nucleotide biosynthetic process (GO:0009165))
ACD50_108_3
RIFOXYC2_FULL_OP11_Curtissbacteria_41_11_curated, Curtissbacteria, Microgenomates, Bacteria

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1528..2304
DNA (777bp) protein (259aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
OMPDECASE (db=PatternScan db_id=PS00156 from=87 to=100 evalue=0.0 interpro_id=IPR018089 interpro_description=Orotidine 5'-phosphate decarboxylase, active site GO=Molecular Function: orotidine-5'-phosphate decarboxylase activity (GO:0004590), Biological Process: 'de novo' pyrimidine base biosynthetic process (GO:0006207))
pyrF_sub2: orotidine 5'-phosphate decarboxy (db=HMMTigr db_id=TIGR02127 from=3 to=251 evalue=2.3e-76 interpro_id=IPR011995 interpro_description=Orotidine 5'-phosphate decarboxylase, subfamily 2, core GO=Molecular Function: orotidine-5'-phosphate decarboxylase activity (GO:0004590), Biological Process: pyrimidine nucleotide biosynthetic process (GO:0006221))
Ribulose-phoshate binding barrel (db=superfamily db_id=SSF51366 from=2 to=258 evalue=4.1e-75 interpro_id=IPR011060 interpro_description=Ribulose-phosphate binding barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
ACD50_108_4
RIFOXYC2_FULL_OP11_Curtissbacteria_41_11_curated, Curtissbacteria, Microgenomates, Bacteria

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2282..2941
DNA (660bp) protein (220aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
PRTase-like (db=superfamily db_id=SSF53271 from=7 to=213 evalue=1.4e-45)
no description (db=Gene3D db_id=G3DSA:3.40.50.2020 from=17 to=218 evalue=1.1e-40)
pyrE: orotate phosphoribosyltransferase (db=HMMTigr db_id=TIGR00336 from=15 to=184 evalue=2.8e-36 interpro_id=IPR004467 interpro_description=Orotate phosphoribosyl transferase GO=Molecular Function: orotate phosphoribosyltransferase activity (GO:0004588), Biological Process: pyrimidine nucleotide biosynthetic process (GO:0006221))
ACD50_108_5
GWC2_OP11_41_21, Curtissbacteria, Microgenomates, Bacteria

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2942..3874
DNA (933bp) protein (311aa)
pyrD-2; dihydroorotate dehydrogenase
pyrD-2; dihydroorotate dehydrogenase
Dihydroorotate dehydrogenase n=1 Tax=Shewanella violacea DSS12 RepID=D4ZB29_SHEVD (db=UNIREF evalue=7.0e-82 bit_score=307.0 identity=53.25 coverage=98.3922829581994)
seg (db=Seg db_id=seg from=79 to=100)
ACD50_108_6

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comp(3871..4404)
DNA (534bp) protein (178aa)
hypothetical protein
UPF0047 (db=HMMPfam db_id=PF01894 from=20 to=155 evalue=1.7e-26 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
YjbQ-like (db=superfamily db_id=SSF111038 from=2 to=153 evalue=3.9e-24 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
no description (db=Gene3D db_id=G3DSA:2.60.120.460 from=1 to=163 evalue=1.3e-21 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
ACD50_108_7
GWC2_OP11_41_21, Curtissbacteria, Microgenomates, Bacteria

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comp(4571..4714)
DNA (144bp) protein (48aa)
4571..4714 - (rbs_motif=ATAAT rbs_spacer=7bp)
Uncharacterized protein {ECO:0000313|EMBL:KKS01831.1}; TaxID=1618415 species="Bacteria; Microgenomates.;" source="Microgenomates (Curtissbacteria) bacterium GW2011_GWC2_41_21.;"
ACD50_108_8

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4758..4901
DNA (144bp) protein (48aa)
hypothetical protein
putative protease HtpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-] alias=ACD50_49696.4869.8G0008,ACD50_49696.4869.8_8,ACD50_C00108G00008 id=72310 tax=ACD50 species=Tropheryma whipplei genus=Tropheryma taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria organism_group=OP11 organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD64806.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 8 items

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