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ACD5_29

Alias: ACD5_111651.4800.7

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD5_29_1
GWC1_OD1_38_22, Parcubacteria, Bacteria

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comp(43..540)
DNA (498bp) protein (166aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=138 to=160)
transmembrane_regions (db=TMHMM db_id=tmhmm from=101 to=123)
transmembrane_regions (db=TMHMM db_id=tmhmm from=69 to=88)
transmembrane_regions (db=TMHMM db_id=tmhmm from=42 to=59)
ACD5_29_2
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

810..2306
DNA (1497bp) protein (499aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
DPP6 N-terminal domain-like (db=superfamily db_id=SSF82171 from=128 to=477 evalue=4.3e-13)
PEGA (db=HMMPfam db_id=PF08308 from=45 to=113 evalue=6.5e-07 interpro_id=IPR013229 interpro_description=PEGA)
Tax=GWC1_OD1_38_22
ACD5_29_3
GWD2_OD1_38_7, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2689..3093)
DNA (405bp) protein (135aa)
2689..3093 - (rbs_motif=AAA rbs_spacer=3bp)
Uncharacterized protein {ECO:0000313|EMBL:KKQ81242.1}; TaxID=1618706 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWD2_38_7.;"
ACD5_29_4
GWD2_OD1_38_7, Moranbacteria, Parcubacteria, Bacteria

Not on your lists


comp(3264..3845)
DNA (582bp) protein (194aa)
30S ribosomal protein S9
seg (db=Seg db_id=seg from=176 to=187)
seg (db=Seg db_id=seg from=10 to=59)
RIBOSOMAL_S9 (db=PatternScan db_id=PS00360 from=132 to=150 evalue=0.0 interpro_id=IPR020574 interpro_description=Ribosomal protein S9, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD5_29_5
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists


comp(3874..4380)
DNA (507bp) protein (169aa)
30S ribosomal protein S9
30S ribosomal protein S9 n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMW6_9DELT (db=UNIREF evalue=5.0e-10 bit_score=66.6 identity=44.16 coverage=42.603550295858)
seg (db=Seg db_id=seg from=137 to=150)
seg (db=Seg db_id=seg from=155 to=167)
ACD5_29_6

Not on your lists


comp(4476..4832)
DNA (357bp) protein (119aa)
50S ribosomal protein L13
Ribosomal protein L13 n=1 Tax=Filifactor alocis ATCC 35896 RepID=D6GR79_9FIRM (db=UNIREF evalue=1.0e-29 bit_score=132.0 identity=55.96 coverage=90.7563025210084)
Ribosomal_L13 (db=HMMPfam db_id=PF00572 from=1 to=111 evalue=1.6e-38 interpro_id=IPR005822 interpro_description=Ribosomal protein L13 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rplM_bact: ribosomal protein L13 (db=HMMTigr db_id=TIGR01066 from=1 to=115 evalue=3.7e-36 interpro_id=IPR005823 interpro_description=Ribosomal protein L13, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Displaying 6 items

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