Alias: ACD5_35019.15531.9
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD5_30_1
uncultured bacterium, Bacteria
|
Not on your lists |
comp(2..1390)
|
seg (db=Seg db_id=seg from=15 to=30)
transmembrane_regions (db=TMHMM db_id=tmhmm from=11 to=33)
PROKAR_NTER_METHYL (db=PatternScan db_id=PS00409 from=11 to=31 evalue=0.0 interpro_id=IPR001120 interpro_description=Prokaryotic N-terminal methylation site)
Cna protein B-type domain (db=superfamily db_id=SSF49478 from=158 to=230 evalue=9.7e-05 interpro_id=IPR008970 interpro_description=Collagen-binding surface protein Cna, B-type domain GO=Molecular Function: binding (GO:0005488))
|
|
ACD5_30_2
uncultured bacterium, Bacteria
|
Not on your lists |
comp(2814..4562)
|
secretion system protein E
secretion system protein E
Type II secretion system protein E n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KT43_9BACT (db=UNIREF evalue=2.0e-148 bit_score=530.0 identity=45.64 coverage=99.6569468267582)
T2SP_E (db=PatternScan db_id=PS00662 from=378 to=392 evalue=0.0 interpro_id=IPR001482 interpro_description=Type II secretion system protein E GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: transport (GO:0006810))
|
|
ACD5_30_3
uncultured bacterium, Bacteria
|
Not on your lists |
comp(4642..5013)
|
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
CheY-like (db=superfamily db_id=SSF52172 from=1 to=121 evalue=2.5e-30 interpro_id=IPR011006 interpro_description=CheY-like)
no description (db=HMMSmart db_id=SM00448 from=2 to=116 evalue=2.1e-26 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=3 to=123 evalue=2.3e-26)
|
|
ACD5_30_4
uncultured bacterium, Bacteria
|
Not on your lists |
comp(5078..6043)
|
multi-sensor signal transduction histidine kinase
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=84)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=52)
TWO COMPONENT SENSOR HISTIDINE KINASE (PHOR) (db=HMMPanther db_id=PTHR23283:SF34 from=4 to=316 evalue=9.5e-65)
|
|
ACD5_30_5
uncultured bacterium, Bacteria
|
Not on your lists |
6092..6271
|
6092..6271 + (rbs_motif=TAAA rbs_spacer=3bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE25428.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
|
|
ACD5_30_6
uncultured bacterium, Bacteria
|
Not on your lists |
comp(6277..7329)
|
GTP-binding protein YchF
GTP-binding protein YchF
GTP-binding protein YchF n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSK0_9FIRM (db=UNIREF evalue=1.0e-90 bit_score=336.0 identity=49.04 coverage=98.8603988603989)
seg (db=Seg db_id=seg from=228 to=248)
|
|
ACD5_30_7
uncultured bacterium, Bacteria
|
Not on your lists |
7851..9032
|
ThiI; thiamine biosynthesis protein ThiI
Probable tRNA sulfurtransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EC56_9ACTN (db=UNIREF evalue=5.0e-74 bit_score=281.0 identity=42.53 coverage=95.6852791878173)
seg (db=Seg db_id=seg from=173 to=183)
seg (db=Seg db_id=seg from=235 to=247)
|
|
ACD5_30_8
uncultured bacterium, Bacteria
|
Not on your lists |
comp(9103..9888)
|
seg (db=Seg db_id=seg from=119 to=131)
seg (db=Seg db_id=seg from=80 to=94)
transmembrane_regions (db=TMHMM db_id=tmhmm from=109 to=131)
transmembrane_regions (db=TMHMM db_id=tmhmm from=74 to=96)
|
|
ACD5_30_9
uncultured bacterium, Bacteria
|
Not on your lists |
comp(9947..10540)
|
ECF subfamily RNA polymerase sigma factor
coiled-coil (db=Coil db_id=coil from=119 to=140 evalue=NA)
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=29 to=192 evalue=1.2e-41 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=9 to=122 evalue=9.1e-21 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
|
|
ACD5_30_10
uncultured bacterium, Bacteria
|
Not on your lists |
comp(10701..11822)
|
alanine racemase
ALANINE_RACEMASE (db=PatternScan db_id=PS00395 from=31 to=41 evalue=0.0 interpro_id=IPR020622 interpro_description=Alanine racemase, pyridoxal-phosphate attachment site GO=Biological Process: alanine metabolic process (GO:0006522), Molecular Function: alanine racemase activity (GO:0008784))
alr: alanine racemase (db=HMMTigr db_id=TIGR00492 from=3 to=373 evalue=1.1e-76 interpro_id=IPR000821 interpro_description=Alanine racemase GO=Biological Process: alanine metabolic process (GO:0006522), Molecular Function: alanine racemase activity (GO:0008784))
PLP-binding barrel (db=superfamily db_id=SSF51419 from=7 to=246 evalue=4.7e-49)
|
|
ACD5_30_11
uncultured bacterium, Bacteria
|
Not on your lists |
comp(11981..12625)
|
endonuclease III (EC:4.2.99.18)
nth: endonuclease III (db=HMMTigr db_id=TIGR01083 from=10 to=206 evalue=8.6e-76 interpro_id=IPR005759 interpro_description=Endonuclease III/Nth GO=Molecular Function: DNA-(apurinic or apyrimidinic site) lyase activity (GO:0003906), Cellular Component: intracellular (GO:0005622), Biological Process: base-excision repair (GO:0006284))
A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III (db=HMMPanther db_id=PTHR10359 from=30 to=208 evalue=4.4e-59)
ENDONUCLEASE III (db=HMMPanther db_id=PTHR10359:SF2 from=30 to=208 evalue=4.4e-59)
|
|
ACD5_30_12
uncultured bacterium, Bacteria
|
Not on your lists |
comp(12765..13259)
|
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
transmembrane_regions (db=TMHMM db_id=tmhmm from=140 to=162)
transmembrane_regions (db=TMHMM db_id=tmhmm from=81 to=103)
|
|
ACD5_30_13
uncultured bacterium, Bacteria
|
Not on your lists |
13532..13777
|
seg (db=Seg db_id=seg from=32 to=48)
Uncharacterized protein {ECO:0000313|EMBL:EKE25415.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
|
|
ACD5_30_14
uncultured bacterium, Bacteria
|
Not on your lists |
comp(13801..14103)
|
hypothetical protein
no description (db=Gene3D db_id=G3DSA:3.40.30.10 from=1 to=76 evalue=1.2e-16 interpro_id=IPR012335 interpro_description=Thioredoxin fold)
Thioredoxin-like (db=superfamily db_id=SSF52833 from=1 to=76 evalue=2.2e-15 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
Uncharacterized protein {ECO:0000313|EMBL:EKE25416.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
|
|
ACD5_30_15
uncultured bacterium, Bacteria
|
Not on your lists |
comp(14123..15001)
|
cation diffusion facilitator family transporter
transmembrane_regions (db=TMHMM db_id=tmhmm from=148 to=167)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
transmembrane_regions (db=TMHMM db_id=tmhmm from=105 to=127)
|
|
ACD5_30_16
uncultured bacterium, Bacteria
|
Not on your lists |
comp(14998..15318)
|
hypothetical protein
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=3 to=106 evalue=2.7e-21)
no description (db=HMMSmart db_id=SM00418 from=25 to=99 evalue=2.9e-21 interpro_id=IPR001845 interpro_description=HTH transcriptional regulator, ArsR GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=8 to=106 evalue=1.8e-19 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
|