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ACD5_45

Alias: ACD5_2593.4933.9

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD5_45_1

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comp(1..369)
DNA (369bp) protein (123aa)
Single-stranded DNA-binding protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DRP8_EIKCO (db=UNIREF evalue=4.0e-32 bit_score=140.0 identity=54.7 coverage=94.3089430894309)
single-strand binding protein
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=120 evalue=9.7e-45 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
SSB (db=HMMPfam db_id=PF00436 from=3 to=105 evalue=4.0e-39 interpro_id=IPR000424 interpro_description=Primosome PriB/single-strand DNA-binding GO=Molecular Function: single-stranded DNA binding (GO:0003697))
ACD5_45_2

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comp(439..981)
DNA (543bp) protein (181aa)
seg (db=Seg db_id=seg from=125 to=165)
Ribosomal_S6 (db=HMMPfam db_id=PF01250 from=2 to=103 evalue=7.8e-12 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal protein S6 (db=superfamily db_id=SSF54995 from=1 to=106 evalue=3.5e-11 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
no description (db=Gene3D db_id=G3DSA:3.30.70.60 from=1 to=116 evalue=6.0e-11 interpro_id=IPR014717 interpro_description=Translation elongation factor EF1B/ribosomal protein S6)
ACD5_45_3

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comp(1231..1446)
DNA (216bp) protein (72aa)
CSD (db=HMMPfam db_id=PF00313 from=3 to=69 evalue=3.5e-06 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Uncharacterized protein {ECO:0000313|EMBL:EKE25624.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD5_45_4

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1700..3661
DNA (1962bp) protein (654aa)
UvrABC system protein B n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=UVRB_CARHZ (db=UNIREF evalue=0.0 bit_score=813.0 identity=62.12 coverage=98.4709480122324)
uvrB; excinuclease ABC subunit B
uvrB; excinuclease ABC subunit B
coiled-coil (db=Coil db_id=coil from=617 to=638 evalue=NA)
ACD5_45_5

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3801..4934
DNA (1134bp) protein (378aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=47 to=66)
seg (db=Seg db_id=seg from=2 to=41)
seg (db=Seg db_id=seg from=51 to=62)
Displaying 5 items

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