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ACD5_70

Alias: ACD5_29696.8318.9

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD5_70_1

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25..462
DNA (438bp) protein (146aa)
peptidase M23 family protein
Duplicated hybrid motif (db=superfamily db_id=SSF51261 from=3 to=144 evalue=1.2e-28 interpro_id=IPR011055 interpro_description=Duplicated hybrid motif)
Peptidase_M23 (db=HMMPfam db_id=PF01551 from=28 to=123 evalue=1.2e-24 interpro_id=IPR016047 interpro_description=Peptidase M23)
M23/M37 PEPTIDASE FAMILY MEMBER (db=HMMPanther db_id=PTHR21666:SF7 from=1 to=122 evalue=3.0e-17 interpro_id=IPR002886 interpro_description=Peptidase M23B GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508))
ACD5_70_2

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481..672
DNA (192bp) protein (64aa)
481..672 + (rbs_motif=TAA rbs_spacer=11bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE25552.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD5_70_3

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919..1824
DNA (906bp) protein (302aa)
Tyrosine recombinase n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TRF9_9MICO (db=UNIREF evalue=1.0e-21 bit_score=107.0 identity=27.59 coverage=81.7880794701987)
integrase/recombinase XerD
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=100 to=299 evalue=2.6e-39 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=105 to=295 evalue=2.5e-30 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
ACD5_70_4

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2533..3036
DNA (504bp) protein (168aa)
GCN5-related N-acetyltransferase n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1IXJ9_DEIGD (db=UNIREF evalue=2.0e-34 bit_score=147.0 identity=43.86 coverage=97.6190476190476)
N-acetyltransferase GCN5
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=64 to=150 evalue=1.4e-11 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EKE25550.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD5_70_5

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3333..3767
DNA (435bp) protein (145aa)
seg (db=Seg db_id=seg from=42 to=53)
coiled-coil (db=Coil db_id=coil from=57 to=78 evalue=NA)
dCMP_cyt_deam_1 (db=HMMPfam db_id=PF00383 from=3 to=117 evalue=2.8e-10 interpro_id=IPR002125 interpro_description=CMP/dCMP deaminase, zinc-binding GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity (GO:0016787))
Cytidine deaminase-like (db=superfamily db_id=SSF53927 from=1 to=80 evalue=6.3e-08 interpro_id=IPR016193 interpro_description=Cytidine deaminase-like GO=Molecular Function: catalytic activity (GO:0003824))
ACD5_70_6

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4090..4548
DNA (459bp) protein (153aa)
NUDIX hydrolase
NUDIX hydrolase n=1 Tax=Nitrosopumilus maritimus SCM1 RepID=A9A3Q1_NITMS (db=UNIREF evalue=2.0e-23 bit_score=111.0 identity=39.73 coverage=86.9281045751634)
NUDIX_BOX (db=PatternScan db_id=PS00893 from=39 to=60 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=5 to=150 evalue=2.1e-23 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
ACD5_70_7

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4671..4907
DNA (237bp) protein (79aa)
4671..4907 + (rbs_motif=TAAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE25545.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD5_70_8

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4950..6761
DNA (1812bp) protein (604aa)
protein-export membrane protein SecD
SecD/SecF/SecDF export membrane protein:SecD export membrane protein n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4C2U1_CROWT (db=UNIREF evalue=9.0e-71 bit_score=271.0 identity=37.75 coverage=69.5364238410596)
seg (db=Seg db_id=seg from=59 to=71)
transmembrane_regions (db=TMHMM db_id=tmhmm from=431 to=450)
ACD5_70_9

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6780..7682
DNA (903bp) protein (301aa)
secF; protein-export membrane protein SecF
transmembrane_regions (db=TMHMM db_id=tmhmm from=240 to=262)
transmembrane_regions (db=TMHMM db_id=tmhmm from=125 to=144)
transmembrane_regions (db=TMHMM db_id=tmhmm from=156 to=178)
ACD5_70_10

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7801..8076
DNA (276bp) protein (92aa)
seg (db=Seg db_id=seg from=8 to=14)
Uncharacterized protein {ECO:0000313|EMBL:EKE25548.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 10 items

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