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ACD61_49

Alias: ACD61_73820.10891.9

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD61_49_1

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1..1269
DNA (1269bp) protein (423aa)
putative peptidoglycan lipid II flippase MurJ
transmembrane_regions (db=TMHMM db_id=tmhmm from=234 to=256)
transmembrane_regions (db=TMHMM db_id=tmhmm from=197 to=219)
seg (db=Seg db_id=seg from=209 to=221)
ACD61_49_2

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comp(1647..1898)
DNA (252bp) protein (84aa)
seg (db=Seg db_id=seg from=10 to=20)
Uncharacterized protein {ECO:0000313|EMBL:EKD52758.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_49_3

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2630..3100
DNA (471bp) protein (157aa)
GTP-binding protein LepA
seg (db=Seg db_id=seg from=123 to=134)
LepA_C (db=HMMPfam db_id=PF06421 from=50 to=155 evalue=5.8e-41 interpro_id=IPR013842 interpro_description=GTP-binding protein LepA, C-terminal)
EFG_C (db=HMMPfam db_id=PF00679 from=2 to=46 evalue=2.0e-07 interpro_id=IPR000640 interpro_description=Translation elongation factor EFG/EF2, C-terminal GO=Molecular Function: GTP binding (GO:0005525))
ACD61_49_4

Not on your lists

comp(3097..4227)
DNA (1131bp) protein (377aa)
seg (db=Seg db_id=seg from=195 to=206)
Uncharacterized protein {ECO:0000313|EMBL:EKD52756.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_49_5

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comp(4169..4288)
DNA (120bp) protein (40aa)
4169..4288 - (rbs_motif=ATA rbs_spacer=5bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD52757.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_49_6

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4495..4857
DNA (363bp) protein (121aa)
4495..4857 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD52752.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_49_7

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comp(4892..6283)
DNA (1392bp) protein (464aa)
xynB; xylan 1,4-beta-xylosidase (EC:3.2.1.37)
seg (db=Seg db_id=seg from=204 to=212)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
GLYCOSYL_HYDROL_F5 (db=PatternScan db_id=PS00659 from=177 to=186 evalue=0.0 interpro_id=IPR018087 interpro_description=Glycoside hydrolase, family 5, conserved site GO=Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553), Biological Process: carbohydrate metabolic process (GO:0005975))
ACD61_49_8

Not on your lists

comp(6337..6786)
DNA (450bp) protein (150aa)
6337..6786 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD52754.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_49_9

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6869..7099
DNA (231bp) protein (77aa)
seg (db=Seg db_id=seg from=38 to=52)
GAF domain-like (db=superfamily db_id=SSF55781 from=11 to=75 evalue=1.9e-08)
HrcA (db=HMMPfam db_id=PF01628 from=2 to=59 evalue=6.0e-05 interpro_id=IPR021153 interpro_description=Winged helix-turn-helix transcription repressor, HrcA, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Uncharacterized protein {ECO:0000313|EMBL:EKD52749.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_49_10

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7093..7545
DNA (453bp) protein (151aa)
Protein GrpE
Protein grpE n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZJ5_9FIRM (db=UNIREF evalue=5.0e-16 bit_score=86.7 identity=39.69 coverage=82.1192052980132)
coiled-coil (db=Coil db_id=coil from=19 to=54 evalue=NA)
GrpE (db=HMMPfam db_id=PF01025 from=7 to=145 evalue=4.8e-28 interpro_id=IPR000740 interpro_description=GrpE nucleotide exchange factor GO=Molecular Function: adenyl-nucleotide exchange factor activity (GO:0000774), Cellular Component: mitochondrion (GO:0005739), Biological Process: protein folding (GO:0006457), Biological Process: protein import into mitochondrial matrix (GO:0030150), Molecular Function: protein homodimerization activity (GO:0042803), Molecular Function: chaperone binding (GO:0051087))
ACD61_49_11

Not on your lists

7566..9470
DNA (1905bp) protein (635aa)
hypothetical protein
hypothetical protein
Chaperone protein dnaK n=1 Tax=Deferribacter desulfuricans SSM1 RepID=D3PA22_DEFDS (db=UNIREF evalue=0.0 bit_score=729.0 identity=64.44 coverage=93.7007874015748)
seg (db=Seg db_id=seg from=543 to=555)
ACD61_49_12

Not on your lists

9893..10264
DNA (372bp) protein (124aa)
9893..10264 + (rbs_motif=AAT rbs_spacer=12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD52747.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_49_13

Not on your lists

10277..10573
DNA (297bp) protein (99aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54)
transmembrane_regions (db=TMHMM db_id=tmhmm from=61 to=83)
Uncharacterized protein {ECO:0000313|EMBL:EKD52748.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_49_14

Not on your lists

10698..10928
DNA (231bp) protein (77aa)
chaperone DnaJ
DNAJ/HSP40 (db=HMMPanther db_id=PTHR11821 from=1 to=77 evalue=6.0e-38 interpro_id=IPR015609 interpro_description=Molecular chaperone, heat shock protein, Hsp40, DnaJ)
CHAPERONE PROTEIN DNAJ (db=HMMPanther db_id=PTHR11821:SF79 from=1 to=77 evalue=6.0e-38)
no description (db=HMMSmart db_id=SM00271 from=5 to=62 evalue=1.2e-32 interpro_id=IPR001623 interpro_description=Heat shock protein DnaJ, N-terminal GO=Molecular Function: heat shock protein binding (GO:0031072))
Displaying 14 items

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