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ar4r2_scaffold_243

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_243_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..433
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YNR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ19183.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
transposase IS200-family protein
ar4r2_scaffold_243_2
unknown

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508..1368
DNA (861bp) protein (287aa)

This feature has no annotations

ar4r2_scaffold_243_3
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1370..2554
DNA (1185bp) protein (395aa)
3-dehydroquinate dehydratase {ECO:0000256|SAAS:SAAS00219718}; EC=4.2.1.10 {ECO:0000256|SAAS:SAAS00219718, ECO:0000313|EMBL:CDL91006.1};; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
aroD; 3-dehydroquinate dehydratase (EC:4.2.1.10)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0003741191
ar4r2_scaffold_243_4
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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2557..3648
DNA (1092bp) protein (364aa)
aroE; Shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5SQC0_9GAMM
Tax=RBG_13_Actinobacteria_35_12_curated
ar4r2_scaffold_243_5

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3688..4695
DNA (1008bp) protein (336aa)
aroG; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
hypothetical protein n=1 Tax=Allobaculum stercoricanis RepID=UPI000368B88B
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EKE29377.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_243_6
Firmicutes bacterium CAG:884, Firmicutes, Bacteria

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4701..5564
DNA (864bp) protein (288aa)
PfkB family carbohydrate kinase n=1 Tax=Firmicutes bacterium CAG:884 RepID=R5MR84_9FIRM
PfkB family carbohydrate kinase {ECO:0000313|EMBL:CCY94255.1}; TaxID=1262990 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:884.;"
ribokinase
ar4r2_scaffold_243_7
GWA1_OD1_47_11, Parcubacteria, Bacteria

Not on your lists

5585..6208
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FX78_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKU55653.1}; TaxID=1618792 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_11.;"
ar4r2_scaffold_243_8

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6219..7367
DNA (1149bp) protein (383aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BAV3_9BACT
3-dehydroquinate synthase {ECO:0000256|SAAS:SAAS00196478}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_243_9
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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7498..8787
DNA (1290bp) protein (430aa)
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19) rbh
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=28173 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio nigripulchritudo.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Vibrio nigripulchritudo SOn1 RepID=U4IX91_9VIBR rbh
ar4r2_scaffold_243_10

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8934..9173
DNA (240bp) protein (80aa)
phnA; alkylphosphonate uptake protein; K06193 phosphonoacetate hydrolase [EC:3.11.1.2] id=68752 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Alkylphosphonate uptake protein {ECO:0000313|EMBL:EKD66243.1}; EC=3.11.1.2 {ECO:0000313|EMBL:EKD66243.1};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
phnA; alkylphosphonate uptake protein (EC:3.11.1.2)
ar4r2_scaffold_243_11
R_WOR_2_48_11, WOR-2, Bacteria

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9287..10396
DNA (1110bp) protein (370aa)
chorismate synthase (EC:4.2.3.5) rbh
Chorismate synthase n=1 Tax=Algoriphagus machipongonensis RepID=A3HVG2_9BACT rbh
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
ar4r2_scaffold_243_12
CG_Pacearch_04, Pacearchaeota, Archaea

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10477..10926
DNA (450bp) protein (150aa)
Tax=CG_Pacearch_04
ar4r2_scaffold_243_13

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11173..12399
DNA (1227bp) protein (409aa)
phenylalanine-trna synthetase-like protein (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] id=131959 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD25625.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
phenylalanyl-tRNA synthetase alpha chain
ar4r2_scaffold_243_14

Not on your lists

12630..12890
DNA (261bp) protein (87aa)
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EKD44567.1}; EC=2.5.1.54 {ECO:0000313|EMBL:EKD44567.1};; EC=5.4.99.5 {ECO:0000313|EMBL:EKD44567.1};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
pheB; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=uncultured bacterium (gcode 4) RepID=K1Z4Y0_9BACT
ar4r2_scaffold_243_15

Not on your lists

12913..13740
DNA (828bp) protein (276aa)
prephenate dehydratase (EC:4.2.1.51)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GWN5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE27760.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_243_16
unknown

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comp(13805..15418)
DNA (1614bp) protein (538aa)

This feature has no annotations

ar4r2_scaffold_243_17

Not on your lists

15602..16441
DNA (840bp) protein (280aa)
prephenate dehydrogenase (EC:1.3.1.12); K04517 prephenate dehydrogenase [EC:1.3.1.12] id=49768 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
putative arogenate/prephenate dehydrogenase (EC:1.3.1.-)
Uncharacterized protein {ECO:0000313|EMBL:EKE27758.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_243_18

Not on your lists

16453..17748
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1Z5R7_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD44566.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_243_19

Not on your lists

comp(17745..19166)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AYH6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD66806.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_243_20

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19305..20174
DNA (870bp) protein (290aa)
Uncharacterized protein n=2 Tax=Acinetobacter guillouiae RepID=N8TG31_ACIGI
Ser/Thr protein phosphatase family protein {ECO:0000313|EMBL:KKT53666.1}; TaxID=1618930 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_22.;"
hypothetical protein
ar4r2_scaffold_243_21

Not on your lists

comp(20176..21387)
DNA (1212bp) protein (404aa)
Putative RumB/ImpB like DNA repair protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWQ8_9PROT id=50989 bin=ACD3 species=Mariprofundus ferrooxydans genus=Mariprofundus taxon_order=Mariprofundales taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE28657.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
DNA polymerase IV
ar4r2_scaffold_243_22

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21522..23129
DNA (1608bp) protein (536aa)
Sensor protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXE4_9DELT id=34889 bin=ACD2 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Sensor protein {ECO:0000313|EMBL:EKE29545.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
sensor histidine kinase protein containing receiver region
ar4r2_scaffold_243_23
Porphyromonas gingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23206..23661
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Porphyromonas gingivalis (strain TDC60) RepID=F5XCK1_PORGT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK26156.1}; TaxID=1030843 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingivalis (strain TDC60).;"
ar4r2_scaffold_243_24
Pseudoalteromonas piscicida, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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23860..24339
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B388E3
Uncharacterized protein {ECO:0000313|EMBL:KJZ04575.1}; TaxID=43662 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas piscicida.;"
hypothetical protein
ar4r2_scaffold_243_25
unknown

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comp(24479..24928)
DNA (450bp) protein (150aa)

This feature has no annotations

ar4r2_scaffold_243_26

Not on your lists

comp(24955..26502)
DNA (1548bp) protein (516aa)
int; integrase id=69303 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Integrase {ECO:0000313|EMBL:EKD65821.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
resolvase domain-containing protein
ar4r2_scaffold_243_27
unknown

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comp(26506..26745)
DNA (240bp) protein (80aa)

This feature has no annotations

ar4r2_scaffold_243_28
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

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comp(26693..26941)
DNA (249bp) protein (83aa)
Transcriptional regulator, XRE family id=3074523 bin=GWF2_OP3_43_52 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
ar4r2_scaffold_243_29
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

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27300..28811
DNA (1512bp) protein (504aa)
hypothetical protein id=7202297 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_62_13__curated
ar4r2_scaffold_243_30
unknown

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28834..29502
DNA (669bp) protein (223aa)

This feature has no annotations

Displaying items 1-30 of 51 in total

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