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ar4r2_scaffold_1519

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1519_1

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comp(3..1712)
DNA (1710bp) protein (570aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GDP7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE28409.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1519_2

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1843..2604
DNA (762bp) protein (254aa)
coiled-coil 81..102 id=49536 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE27717.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Transcriptional regulator, TrmB
ar4r2_scaffold_1519_3

Not on your lists


comp(2636..3622)
DNA (987bp) protein (329aa)
Protein RecA n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XJF3_9BACT rbh
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
recA; recombinase A rbh
ar4r2_scaffold_1519_4
CG_GN02-01, Gracilibacteria, Bacteria

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comp(3814..4038)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F6Y1_9BACT
Tax=CG_GN02-01
ar4r2_scaffold_1519_5
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(4061..4669)
DNA (609bp) protein (203aa)
exonuclease RNase T and DNA polymerase III; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] id=123326 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Exonuclease RNase T and DNA polymerase III
Tax=ACD78
ar4r2_scaffold_1519_6
R_OP11_Roizmanbacteria_39_24, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(4776..5054)
DNA (279bp) protein (93aa)
UPI0003D06B87 related cluster n=1 Tax=unknown RepID=UPI0003D06B87
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Roizmanbacteria_39_24_curated
ar4r2_scaffold_1519_7

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5296..6393
DNA (1098bp) protein (366aa)
Polysaccharide pyruvyl transferase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AX48_9BACT
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:EKD66357.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1519_8
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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6384..6998
DNA (615bp) protein (205aa)
putative 3-methyladenine DNA glycosylase (EC:3.2.2.-)
Putative 3-methyladenine DNA glycosylase id=2751878 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
ar4r2_scaffold_1519_9
unknown

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comp(6995..7321)
DNA (327bp) protein (109aa)

This feature has no annotations

ar4r2_scaffold_1519_10
unknown

Not on your lists

comp(7394..8386)
DNA (993bp) protein (331aa)

This feature has no annotations

ar4r2_scaffold_1519_11

Not on your lists

comp(8494..9090)
DNA (597bp) protein (199aa)
kelch repeat protein id=49697 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Kelch repeat protein {ECO:0000313|EMBL:EKE27849.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
putative type IV pilin PilA
ar4r2_scaffold_1519_12

Not on your lists

comp(9262..9663)
DNA (402bp) protein (134aa)
Nuc_deoxyrib_tr 28..104 id=132763 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:EKD24634.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
nucleoside 2-deoxyribosyltransferase
ar4r2_scaffold_1519_13
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9810..10865)
DNA (1056bp) protein (352aa)
pheS; phenylalanine--tRNA ligase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Ruminococcus lactaris RepID=B5CQV1_9FIRM rbh
ar4r2_scaffold_1519_14

Not on your lists

11052..11516
DNA (465bp) protein (155aa)
seg 5..21 id=49380 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE27641.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1519_15
unknown

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11542..12480
DNA (939bp) protein (313aa)

This feature has no annotations

ar4r2_scaffold_1519_16
Streptobacillus moniliformis, Streptobacillus, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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12491..13207
DNA (717bp) protein (239aa)
uridylate kinase (EC:2.7.4.22)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=519441 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Streptobacillus.;" source="Streptobacillus moniliformis (strain ATCC 14647 / DSM 12112 / NCTC; 10651 / 9901).;"
Uridylate kinase n=1 Tax=Streptobacillus moniliformis (strain ATCC 14647 / DSM 12112 / NCTC 10651 / 9901) RepID=D1AWM5_STRM9
ar4r2_scaffold_1519_17
unknown

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13358..13588
DNA (231bp) protein (77aa)

This feature has no annotations

ar4r2_scaffold_1519_18
ACD78, Gracilibacteria, Bacteria

Not on your lists

13799..15601
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XWB7_9BACT rbh
hypothetical protein
Tax=ACD78
ar4r2_scaffold_1519_19
Candidatus Saccharibacteria bacterium GW2011_GWA2_46_10, Candidatus Saccharibacteria, Bacteria

Not on your lists

15708..16970
DNA (1263bp) protein (421aa)
Putative lipoprotein n=1 Tax=Bacteriovorax sp. DB6_IX RepID=T0T661_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KKU19502.1}; TaxID=1619069 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWA2_46_10.;"
ar4r2_scaffold_1519_20
Candidatus Saccharibacteria bacterium GW2011_GWA2_46_10, Candidatus Saccharibacteria, Bacteria

Not on your lists

17108..18364
DNA (1257bp) protein (419aa)
PREDICTED: tenascin XB-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBBE76
Uncharacterized protein {ECO:0000313|EMBL:KKU19502.1}; TaxID=1619069 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWA2_46_10.;"
ar4r2_scaffold_1519_21

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comp(18417..19328)
DNA (912bp) protein (304aa)
Methicillin resistance protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F5P6_9BACT
Methicillin resistance protein {ECO:0000313|EMBL:EKE26406.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
femA; FemA
ar4r2_scaffold_1519_22
RIFOXYD2_FULL_RIF_OD1_02_43_21_curated, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

comp(19331..20500)
DNA (1170bp) protein (390aa)
udk; uridine kinase (EC:2.7.1.48); K00876 uridine kinase [EC:2.7.1.48] id=51017 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
uridine kinase (EC:2.7.1.48)
Tax=RIFOXYD2_FULL_RIF_OD1_02_43_21_curated
ar4r2_scaffold_1519_23
Parcubacteria bacterium GW2011_GWF1_45_5, Parcubacteria, Bacteria

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comp(20511..20924)
DNA (414bp) protein (138aa)
NUDIX hydrolase n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EBZ7_CHLL2
ADP-ribose pyrophosphatase
NUDIX hydrolase {ECO:0000313|EMBL:KKU10373.1}; Flags: Fragment;; TaxID=1618958 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF1_45_5.;"
ar4r2_scaffold_1519_24

Not on your lists

comp(20943..21947)
DNA (1005bp) protein (335aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AWF3_9BACT rbh
Holliday junction ATP-dependent DNA helicase ruvB rbh
ar4r2_scaffold_1519_25

Not on your lists

22198..23691
DNA (1494bp) protein (498aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Ribonuclease Y n=1 Tax=uncultured bacterium (gcode 4) RepID=K1Z3M4_9BACT rbh
metal dependent phosphohydrolase rbh
ar4r2_scaffold_1519_26
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

23721..24518
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BW20_9BACT
Tax=CG_GN02-02
ar4r2_scaffold_1519_27

Not on your lists

24521..26002
DNA (1482bp) protein (494aa)
ComEC-like cytoplasmic membrane protein ; K02238 competence protein ComEC id=69470 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD66458.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
DNA internalization-related competence protein ComEC/Rec2
ar4r2_scaffold_1519_28
Salpingoeca rosetta, Salpingoeca, Choanoflagellida, Eukaryota

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26066..28381
DNA (2316bp) protein (772aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) RepID=F2UT94_SALR5
Putative uncharacterized protein {ECO:0000313|EMBL:EGD81850.1}; Flags: Fragment;; TaxID=946362 species="Eukaryota; Choanoflagellida; Salpingoecidae; Salpingoeca.;" source="Salpingoeca rosetta (strain ATCC 50818 / BSB-021).;"
ar4r2_scaffold_1519_29
unknown

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28503..29297
DNA (795bp) protein (265aa)

This feature has no annotations

Displaying 29 items

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