ggKbase home page

ACD66_41

Alias: ACD66_54067.3856.7

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD66_41_1
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

1..114
DNA (114bp) protein (38aa)
1..114 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKS17648.1}; TaxID=1618981 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWB1_41_7.;"
ACD66_41_2
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

163..1272
DNA (1110bp) protein (370aa)
hypothetical protein
hypothetical protein
Peptide chain release factor 2 n=1 Tax=Exiguobacterium sp. AT1b RepID=RF2_EXISA (db=UNIREF evalue=2.0e-88 bit_score=329.0 identity=48.54 coverage=91.6216216216216)
coiled-coil (db=Coil db_id=coil from=93 to=114 evalue=NA)
ACD66_41_3
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

1313..2239
DNA (927bp) protein (309aa)
nucleoside-diphosphate-sugar epimerase
seg (db=Seg db_id=seg from=39 to=48)
NAD DEPENDENT EPIMERASE/DEHYDRATASE (db=HMMPanther db_id=PTHR10366 from=10 to=308 evalue=1.1e-82)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=7 to=306 evalue=1.0e-80)
ACD66_41_4
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

2318..2911
DNA (594bp) protein (198aa)
putative translation factor (Sua5-like)
YrdC/RibB (db=superfamily db_id=SSF55821 from=9 to=193 evalue=9.0e-44 interpro_id=IPR017945 interpro_description=DHBP synthase RibB-like alpha/beta domain)
no description (db=Gene3D db_id=G3DSA:3.90.870.10 from=9 to=197 evalue=2.6e-43 interpro_id=IPR017945 interpro_description=DHBP synthase RibB-like alpha/beta domain)
Sua5_yciO_yrdC (db=HMMPfam db_id=PF01300 from=14 to=193 evalue=5.7e-43 interpro_id=IPR006070 interpro_description=Sua5/YciO/YrdC, N-terminal)
ACD66_41_5
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

2908..3687
DNA (780bp) protein (260aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
ksgA: dimethyladenosine transferase (db=HMMTigr db_id=TIGR00755 from=1 to=254 evalue=4.8e-63 interpro_id=IPR011530 interpro_description=Ribosomal RNA adenine dimethylase GO=Biological Process: rRNA processing (GO:0006364), Molecular Function: rRNA (adenine) methyltransferase activity (GO:0016433))
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=259 evalue=1.2e-56)
RrnaAD (db=HMMPfam db_id=PF00398 from=2 to=255 evalue=3.3e-45 interpro_id=IPR001737 interpro_description=Ribosomal RNA adenine methylase transferase GO=Biological Process: rRNA modification (GO:0000154), Molecular Function: rRNA (adenine-N6,N6-)-dimethyltransferase activity (GO:0000179), Molecular Function: rRNA methyltransferase activity (GO:0008649))
ACD66_41_6

Not on your lists

3735..3890
DNA (156bp) protein (52aa)
3735..3890 + (rbs_motif=TAA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD47088.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 6 items

View Taxonomy