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ACD66_54

Alias: ACD66_207464.4085.6

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD66_54_1
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

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495..917
DNA (423bp) protein (141aa)
hypothetical protein
alpha/beta knot (db=superfamily db_id=SSF75217 from=2 to=139 evalue=7.5e-41)
SPOUT_MTase (db=HMMPfam db_id=PF02590 from=34 to=139 evalue=7.2e-33 interpro_id=IPR003742 interpro_description=SPOUT methyltransferase, predicted GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: rRNA processing (GO:0006364), Molecular Function: methyltransferase activity (GO:0008168))
Predicted methyltransferase, bacterial type (db=HMMPIR db_id=PIRSF004505 from=1 to=140 evalue=9.2e-32 interpro_id=IPR003742 interpro_description=SPOUT methyltransferase, predicted GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: rRNA processing (GO:0006364), Molecular Function: methyltransferase activity (GO:0008168))
ACD66_54_2
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

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comp(981..1232)
DNA (252bp) protein (84aa)
981..1232 - (rbs_motif=None rbs_spacer=None)
Radical SAM domain protein {ECO:0000313|EMBL:KKS17014.1}; TaxID=1618981 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWB1_41_7.;"
ACD66_54_3
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

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comp(1219..2346)
DNA (1128bp) protein (376aa)
radical SAM domain protein
seg (db=Seg db_id=seg from=359 to=370)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=171 to=356 evalue=7.0e-22)
Radical_SAM (db=HMMPfam db_id=PF04055 from=197 to=351 evalue=1.7e-08 interpro_id=IPR007197 interpro_description=Radical SAM GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: iron-sulfur cluster binding (GO:0051536))
ACD66_54_4
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

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2547..3359
DNA (813bp) protein (271aa)
Transcriptional regulator, TrmB
Transcriptional regulator, TrmB n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9V7_9BACT (db=UNIREF evalue=1.0e-16 bit_score=90.5 identity=26.64 coverage=89.2988929889299)
TrmB (db=HMMPfam db_id=PF01978 from=12 to=74 evalue=9.3e-11 interpro_id=IPR002831 interpro_description=Transcription regulator TrmB, N-terminal)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=11 to=105 evalue=1.5e-07)
ACD66_54_5
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

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comp(3375..4118)
DNA (744bp) protein (248aa)
hypothetical protein
seg (db=Seg db_id=seg from=55 to=70)
coiled-coil (db=Coil db_id=coil from=49 to=70 evalue=NA)
APH (db=HMMPfam db_id=PF01636 from=2 to=148 evalue=4.0e-16 interpro_id=IPR002575 interpro_description=Aminoglycoside phosphotransferase)
Displaying 5 items

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