ggKbase home page

ACD83_23

Alias: ACD83_68286.5120.6

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD83_23_1

Not on your lists

comp(3..719)
DNA (717bp) protein (239aa)
Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPX4_9FIRM (db=UNIREF evalue=4.0e-71 bit_score=271.0 identity=57.51 coverage=95.397489539749)
coiled-coil (db=Coil db_id=coil from=164 to=185 evalue=NA)
ThrRS/AlaRS common domain (db=superfamily db_id=SSF55186 from=2 to=183 evalue=9.8e-56 interpro_id=IPR018163 interpro_description=Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO=Molecular Function: nucleotide binding (GO:0000166))
ACD83_23_2

Not on your lists


comp(970..1323)
DNA (354bp) protein (118aa)
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 n=2 Tax=Caulobacteraceae RepID=RL20_PHEZH (db=UNIREF evalue=3.0e-26 bit_score=120.0 identity=58.77 coverage=95.7627118644068)
seg (db=Seg db_id=seg from=47 to=58)
rplT_bact: ribosomal protein L20 (db=HMMTigr db_id=TIGR01032 from=1 to=113 evalue=6.5e-59 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACD83_23_3
GWA2_Berkelbacteria_38_9, Berkelbacteria, Bacteria

Not on your lists


comp(1361..1555)
DNA (195bp) protein (65aa)
L35p-like (db=superfamily db_id=SSF143034 from=1 to=64 evalue=5.5e-16)
Ribosomal_L35p (db=HMMPfam db_id=PF01632 from=2 to=60 evalue=3.6e-10 interpro_id=IPR021137 interpro_description=Ribosomal protein L35 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMALL35 (db=FPrintScan db_id=PR00064 from=20 to=34 evalue=8.8e-08 interpro_id=IPR001706 interpro_description=Ribosomal protein L35, non-mitochondrial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMALL35 (db=FPrintScan db_id=PR00064 from=2 to=19 evalue=8.8e-08 interpro_id=IPR001706 interpro_description=Ribosomal protein L35, non-mitochondrial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD83_23_4

Not on your lists

comp(1536..2102)
DNA (567bp) protein (189aa)
infC; translation initiation factor IF-3
Translation initiation factor IF-3 n=1 Tax=Roseiflexus sp. RS-1 RepID=A5US38_ROSS1 (db=UNIREF evalue=8.0e-30 bit_score=133.0 identity=43.33 coverage=91.5343915343915)
seg (db=Seg db_id=seg from=2 to=13)
seg (db=Seg db_id=seg from=80 to=89)
ACD83_23_5

Not on your lists

comp(2138..2875)
DNA (738bp) protein (246aa)
DAGK_cat (db=HMMPfam db_id=PF00781 from=2 to=107 evalue=7.7e-09 interpro_id=IPR001206 interpro_description=Diacylglycerol kinase, catalytic domain GO=Molecular Function: diacylglycerol kinase activity (GO:0004143), Biological Process: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway (GO:0007205))
Uncharacterized protein {ECO:0000313|EMBL:EKD22814.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD83_23_6
GWA2_Berkelbacteria_38_9, Berkelbacteria, Bacteria

Not on your lists

comp(2878..3261)
DNA (384bp) protein (128aa)
hypothetical protein
Putative uncharacterized protein n=3 Tax=Chloroflexus RepID=A9WIE0_CHLAA (db=UNIREF evalue=8.0e-19 bit_score=95.9 identity=43.27 coverage=80.46875)
DUF583 (db=HMMPfam db_id=PF04519 from=8 to=102 evalue=4.2e-27 interpro_id=IPR007607 interpro_description=Protein of unknown function DUF583)
Putative uncharacterized protein Tax=GWA2_Berkelbacteria_38_9
ACD83_23_7

Not on your lists

3392..5152
DNA (1761bp) protein (587aa)
excinuclease ABC subunit A
excinuclease ABC subunit A
Excinuclease ABC, A subunit n=1 Tax=Thermincola sp. JR RepID=D5XCB4_9FIRM (db=UNIREF evalue=2.0e-180 bit_score=636.0 identity=58.08 coverage=95.0596252129472)
seg (db=Seg db_id=seg from=546 to=558)
Displaying 7 items

View Taxonomy