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ACD9_55

Alias: ACD9_39985.5453.8

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD9_55_1

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1..2322
DNA (2322bp) protein (774aa)
DNA polymerase I
DNA polymerase I
DNA polymerase I n=3 Tax=Dehalococcoides RepID=A5FPU6_DEHSB (db=UNIREF evalue=7.0e-151 bit_score=538.0 identity=40.43 coverage=99.0956072351421)
coiled-coil (db=Coil db_id=coil from=732 to=753 evalue=NA)
ACD9_55_2

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2437..3282
DNA (846bp) protein (282aa)
formamidopyrimidine-DNA glycosylase
ZF_FPG_1 (db=PatternScan db_id=PS01242 from=256 to=280 evalue=0.0 interpro_id=IPR015887 interpro_description=DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-(apurinic or apyrimidinic site) lyase activity (GO:0003906), Biological Process: DNA repair (GO:0006281), Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity, hydrolyzing N-glycosyl compounds (GO:0016799))
fpg: formamidopyrimidine-DNA glycosylase (db=HMMTigr db_id=TIGR00577 from=1 to=280 evalue=6.5e-74 interpro_id=IPR000191 interpro_description=DNA glycosylase/AP lyase GO=Molecular Function: DNA-(apurinic or apyrimidinic site) lyase activity (GO:0003906), Biological Process: DNA repair (GO:0006281), Molecular Function: zinc ion binding (GO:0008270), Molecular Function: oxidized purine base lesion DNA N-glycosylase activity (GO:0008534))
FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE (db=HMMPanther db_id=PTHR22993 from=25 to=280 evalue=1.2e-39)
ACD9_55_3

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3308..4417
DNA (1110bp) protein (370aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
DUF3048 (db=HMMPfam db_id=PF11258 from=67 to=354 evalue=1.5e-50 interpro_id=IPR021416 interpro_description=Protein of unknown function DUF3048)
putative lipoprotein alias=ACD9_39985.5453.8G0003,ACD9_39985.5453.8_3,ACD9_C00055G00003 id=137861 tax=ACD9 species=Bacillus licheniformis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
ACD9_55_4

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4445..5410
DNA (966bp) protein (322aa)
DNA polymerase III subunit delta
holA: DNA polymerase III, delta subunit (db=HMMTigr db_id=TIGR01128 from=1 to=321 evalue=1.0e-30 interpro_id=IPR005790 interpro_description=DNA polymerase III, delta subunit GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA replication (GO:0006260))
DNA polymerase III clamp loader subunits, C-terminal domain (db=superfamily db_id=SSF48019 from=201 to=321 evalue=1.8e-17 interpro_id=IPR008921 interpro_description=DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA replication (GO:0006260))
DNA_pol3_delta (db=HMMPfam db_id=PF06144 from=4 to=178 evalue=6.1e-12 interpro_id=IPR010372 interpro_description=DNA polymerase III, delta GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Cellular Component: DNA polymerase III complex (GO:0009360))
Displaying 4 items

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