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gwf2_scaffold_150

Alias: PER_GWF2_43_18_1

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_150_1
unknown

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1..69
DNA (69bp) protein (23aa)

This feature has no annotations

gwf2_scaffold_150_2
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

299..1102
DNA (804bp) protein (268aa)
Tax=PER_GWF2_43_17
gwf2_scaffold_150_3
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(1032..1685)
DNA (654bp) protein (218aa)
nth; HhH-GPD:Iron-sulfur cluster loop (FCL) (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=PER_GWF2_43_17
endonuclease III (EC:4.2.99.18)
Endonuclease III n=6 Tax=Pelosinus fermentans RepID=I8T0K6_9FIRM
ENDONUCLEASE_III_2 (db=PatternScan db_id=PS01155 from=108 to=137 evalue=0.0 interpro_id=IPR004036 interpro_description=Endonuclease III, conserved site-2 GO=Molecular Function: endonuclease activity (GO:0004519), Biological Process: DNA repair (GO:0006281))
gwf2_scaffold_150_4
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

1714..2166
DNA (453bp) protein (151aa)
Tax=PER_GWF2_43_17
gwf2_scaffold_150_5
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

2183..3049
DNA (867bp) protein (289aa)
Apurinic endonuclease Apn1, deoxyribonuclease IV {ECO:0000313|EMBL:KKT02903.1}; EC=3.1.21.2 {ECO:0000313|EMBL:KKT02903.1};; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacte
Endonuclease IV (EC:3.1.21.2)
Probable endonuclease 4 n=1 Tax=uncultured marine crenarchaeote HF4000_APKG6D9 RepID=B3T958_9ARCH
AP_NUCLEASE_F2_3 (db=PatternScan db_id=PS00731 from=226 to=242 evalue=0.0 interpro_id=IPR018246 interpro_description=AP endonuclease, family 2, zinc binding site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: endonuclease activity (GO:0004519), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281), Molecular Function: zinc ion binding (GO:0008270))
gwf2_scaffold_150_6
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(3046..3369)
DNA (324bp) protein (108aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT02904.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
seg (db=Seg db_id=seg from=39 to=52)
coiled-coil (db=Coil db_id=coil from=61 to=82 evalue=NA)
gwf2_scaffold_150_7
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(3362..4291)
DNA (930bp) protein (310aa)
Cellulosome-anchoring protein n=1 Tax=sediment metagenome RepID=D9PNH4_9ZZZZ
hypothetical protein; K03642 rare lipoprotein A Tax=PER_GWF2_43_17
hypothetical protein
(db=HMMPfam db_id=PF03330 from=213 to=300 evalue=1.0e-17 interpro_id=IPR009009 interpro_description=Barwin-related endoglucanase)
gwf2_scaffold_150_8
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria

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comp(4346..4849)
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FWV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKT20395.1}; TaxID=1619056 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_43_8.;"
jag protein
R3H domain (db=superfamily db_id=SSF82708 from=91 to=154 evalue=1.1e-06)
gwf2_scaffold_150_9
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(4863..6086)
DNA (1224bp) protein (408aa)
60 kDa inner membrane insertion protein n=4 Tax=Desulfitobacterium RepID=B8G0L5_DESHD
Uncharacterized protein {ECO:0000313|EMBL:KKT02907.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=179 to=201)
gwf2_scaffold_150_10
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists


comp(6083..6409)
DNA (327bp) protein (109aa)
Ribonuclease P, ribonuclease P protein component {ECO:0000313|EMBL:KKT02908.1}; EC=3.1.26.5 {ECO:0000313|EMBL:KKT02908.1};; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacte
Ribonuclease P protein component n=13 Tax=Microcystis RepID=RNPA_MICAN
rnpA; ribonuclease P
no description (db=Gene3D db_id=G3DSA:3.30.230.10 from=2 to=108 evalue=1.1e-13 interpro_id=IPR014721 interpro_description=Ribosomal protein S5 domain 2-type fold, subgroup)
gwf2_scaffold_150_11
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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comp(6411..6539)
DNA (129bp) protein (43aa)
Ribosomal protein L34 Tax=PER_GWF2_43_17
rpmH_bact: ribosomal protein L34 (db=HMMTigr db_id=TIGR01030 from=4 to=42 evalue=1.8e-06 interpro_id=IPR000271 interpro_description=Ribosomal protein L34 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
(db=HMMPfam db_id=PF00468 from=4 to=42 evalue=2.3e-13 interpro_id=IPR000271 interpro_description=Ribosomal protein L34 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwf2_scaffold_150_12
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

6654..8609
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6P6_CALAS
Uncharacterized protein {ECO:0000313|EMBL:KKT02910.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=291 to=309)
seg (db=Seg db_id=seg from=211 to=223)
gwf2_scaffold_150_13
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(8844..9368)
DNA (525bp) protein (175aa)
Deoxycytidylate deaminase, dCMP deaminase {ECO:0000313|EMBL:KKT02911.1}; EC=3.5.4.12 {ECO:0000313|EMBL:KKT02911.1};; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bac
Deoxycytidylate deaminase n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9UCJ6_FERPD
deoxycytidylate deaminase
Cytidine deaminase-like (db=superfamily db_id=SSF53927 from=19 to=162 evalue=2.4e-22 interpro_id=IPR016193 interpro_description=Cytidine deaminase-like GO=Molecular Function: catalytic activity (GO:0003824))
gwf2_scaffold_150_14
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(9373..10236)
DNA (864bp) protein (288aa)
Ribose 1,5-bisphosphate isomerase n=5 Tax=Thermococcus RepID=R15PI_PYRKO
Translation initiation factor IF-2, translation initiation factor eIF-2B subunit delta {ECO:0000313|EMBL:KKT02912.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria ba
translation initiation factor IF-2
NagB/RpiA/CoA transferase-like (db=superfamily db_id=SSF100950 from=1 to=283 evalue=1.0e-55)
gwf2_scaffold_150_15
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(10238..11716)
DNA (1479bp) protein (493aa)
AMP phosphorylase, thymidine phosphorylase {ECO:0000313|EMBL:KKT02913.1}; EC=2.4.2.4 {ECO:0000313|EMBL:KKT02913.1};; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bac
Putative thymidine phosphorylase n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RDI7_ARCPA rbh
AMP phosphorylase
THYMID_PHOSPHORYLASE (db=PatternScan db_id=PS00647 from=196 to=211 evalue=0.0 interpro_id=IPR017872 interpro_description=Pyrimidine-nucleoside phosphorylase, conserved site GO=Biological Process: pyrimidine base metabolic process (GO:0006206))
gwf2_scaffold_150_16
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(11803..12540)
DNA (738bp) protein (246aa)
Pyruvate formate-lyase activating enzyme, pyruvate formate lyase activating enzyme {ECO:0000313|EMBL:KKT02914.1}; EC=1.97.1.4 {ECO:0000313|EMBL:KKT02914.1};; TaxID=1619068 species="Bacteria; Peregrini
Pyruvate formate-lyase activating enzyme n=6 Tax=Clostridium thermocellum RepID=A3DCR4_CLOTH
pyruvate formate-lyase activating enzyme
RADICAL_ACTIVATING (db=PatternScan db_id=PS01087 from=18 to=39 evalue=0.0 interpro_id=IPR001989 interpro_description=Radical-activating enzyme, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation-reduction process (GO:0055114))
gwf2_scaffold_150_17
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(12548..14857)
DNA (2310bp) protein (770aa)
pflB; formate acetyltransferase (EC:2.3.1.54); K00656 formate C-acetyltransferase [EC:2.3.1.54] Tax=PER_GWF2_43_17
pflB; formate acetyltransferase (EC:2.3.1.54)
Pyruvate formate lyase I n=1 Tax=Clostridium ultunense Esp RepID=M1ZFI5_9CLOT rbh
GLY_RADICAL_1 (db=PatternScan db_id=PS00850 from=739 to=747 evalue=0.0 interpro_id=IPR019777 interpro_description=Formate C-acetyltransferase glycine radical, conserved site)
gwf2_scaffold_150_18
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

14968..16065
DNA (1098bp) protein (366aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT02916.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
gwf2_scaffold_150_19
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

16077..16691
DNA (615bp) protein (205aa)
seg Tax=PER_GWF2_43_17
seg (db=Seg db_id=seg from=163 to=174)
coiled-coil (db=Coil db_id=coil from=106 to=127 evalue=NA)
gwf2_scaffold_150_20
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(16710..17885)
DNA (1176bp) protein (392aa)
ackA; acetate kinase (EC:2.7.2.1); K00925 acetate kinase [EC:2.7.2.1] Tax=PER_GWF2_43_17
ackA; acetate kinase (EC:2.7.2.1)
Acetate kinase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=ACKA_CARHZ rbh
ACETATE_KINASE_1 (db=PatternScan db_id=PS01075 from=3 to=14 evalue=0.0 interpro_id=IPR023865 interpro_description=Aliphatic acid kinase, short-chain, conserved site GO=Biological Process: metabolic process (GO:0008152), Molecular Function: kinase activity (GO:0016301), Biological Process: phosphorylation (GO:0016310), Molecular Function: phosphotransferase activity, carboxyl group as acceptor (GO:0016774))
gwf2_scaffold_150_21
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(17887..18864)
DNA (978bp) protein (326aa)
pta; phosphate acetyltransferase (EC:2.3.1.8); K00625 phosphate acetyltransferase [EC:2.3.1.8] Tax=PER_GWF2_43_17
pta; phosphate acetyltransferase (EC:2.3.1.8)
phosphotransacetylase n=1 Tax=Ornithinibacillus scapharcae TW25 RepID=UPI000225BCDF rbh
Isocitrate/Isopropylmalate dehydrogenase-like (db=superfamily db_id=SSF53659 from=3 to=323 evalue=1.0e-91)
gwf2_scaffold_150_22
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(18895..19641)
DNA (747bp) protein (249aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT02920.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
seg (db=Seg db_id=seg from=182 to=195)
(db=HMMPfam db_id=PF02811 from=6 to=203 evalue=1.5e-07 interpro_id=IPR004013 interpro_description=PHP, C-terminal GO=Molecular Function: catalytic activity (GO:0003824))
PHP domain-like (db=superfamily db_id=SSF89550 from=1 to=207 evalue=6.5e-23 interpro_id=IPR016195 interpro_description=Polymerase/histidinol phosphatase-like GO=Molecular Function: catalytic activity (GO:0003824))
gwf2_scaffold_150_23
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(19638..19943)
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT02921.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
seg (db=Seg db_id=seg from=5 to=14)
coiled-coil (db=Coil db_id=coil from=40 to=68 evalue=NA)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=6.0)
gwf2_scaffold_150_24
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(19940..20275)
DNA (336bp) protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT02922.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
gwf2_scaffold_150_25
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(20335..20988)
DNA (654bp) protein (218aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT02923.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
seg (db=Seg db_id=seg from=154 to=168)
gwf2_scaffold_150_26
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(21029..22498)
DNA (1470bp) protein (490aa)
Glutamyl/glutaminyl-tRNA synthetase, glutamyl-tRNA synthetase {ECO:0000313|EMBL:KKT02924.1}; EC=6.1.1.17 {ECO:0000313|EMBL:KKT02924.1};; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="P
Glutamate--tRNA ligase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A6K1_MELRP rbh
glutamyl/glutaminyl-tRNA synthetase
AA_TRNA_LIGASE_I (db=PatternScan db_id=PS00178 from=8 to=19 evalue=0.0 interpro_id=IPR001412 interpro_description=Aminoacyl-tRNA synthetase, class I, conserved site GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
gwf2_scaffold_150_27
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

22589..24763
DNA (2175bp) protein (725aa)
Cell division protein FtsK n=1 Tax=Caloramator australicus RC3 RepID=I7LH65_9CLOT rbh
Cell division protein FtsK/SpoIIIE, DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family {ECO:0000313|EMBL:KKT02925.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria b
DNA translocase FtsK
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
gwf2_scaffold_150_28
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria

Not on your lists

comp(24798..27413)
DNA (2616bp) protein (872aa)
Protein translocase subunit SecA n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYM1_THEOJ rbh
Protein translocase subunit SecA {ECO:0000313|EMBL:KKT20374.1}; TaxID=1619056 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_43_8.;"
protein translocase subunit secA
SECA (db=PatternScan db_id=PS01312 from=495 to=510 evalue=0.0 interpro_id=IPR020937 interpro_description=SecA conserved site GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
gwf2_scaffold_150_29
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

27646..28125
DNA (480bp) protein (160aa)
transmembrane_regions Tax=PER_GWF2_43_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
gwf2_scaffold_150_30
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(28421..29836)
DNA (1416bp) protein (472aa)
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6) Tax=PER_GWF2_43_17
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8L2_SPHTD
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
Displaying items 1-30 of 120 in total

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