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gwf2_scaffold_3806

Alias: PER_GWF2_43_18_13

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_3806_1
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(211..522)
DNA (312bp) protein (104aa)
Tax=PER_GWF2_43_17
gwf2_scaffold_3806_2
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(632..2038)
DNA (1407bp) protein (469aa)
glutamyl-tRNA(Gln) amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=PER_GWF2_43_17
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=GATA_SYNFM rbh
glutamyl-tRNA(Gln) amidotransferase subunit A
seg (db=Seg db_id=seg from=148 to=157)
gwf2_scaffold_3806_3
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria

Not on your lists

comp(2035..2325)
DNA (291bp) protein (97aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) RepID=E6TWN3_BACCJ
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000313|EMBL:KKT19384.1}; TaxID=1619056 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_43_8.;"
glutamyl-tRNA amidotransferase
Glu-tRNAGln amidotransferase C subunit (db=superfamily db_id=SSF141000 from=3 to=95 evalue=3.7e-29)
gwf2_scaffold_3806_4
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

2436..2735
DNA (300bp) protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT01507.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
gwf2_scaffold_3806_5
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

2752..3186
DNA (435bp) protein (145aa)
Cytidyltransferase-related enzyme n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TW70_9EURY
Cytidyltransferase-like protein, FAD synthetase {ECO:0000313|EMBL:KKT01508.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
FAD synthetase
seg (db=Seg db_id=seg from=121 to=132)
gwf2_scaffold_3806_6
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

3147..4037
DNA (891bp) protein (297aa)
Cell division protein FtsX n=9 Tax=Veillonella RepID=D1BM82_VEIPT
Uncharacterized protein {ECO:0000313|EMBL:KKT01509.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
cell division protein
seg (db=Seg db_id=seg from=144 to=162)
gwf2_scaffold_3806_7
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

4024..4722
DNA (699bp) protein (233aa)
DNA repair protein RecO n=1 Tax=Desulfosporosinus sp. OT RepID=G2FUJ3_9FIRM
Repair protein RecO, DNA repair protein RecO (Recombination protein O) protein {ECO:0000313|EMBL:KKT01510.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium
recO; DNA repair protein RecO
reco: DNA repair protein RecO (db=HMMTigr db_id=TIGR00613 from=4 to=229 evalue=2.8e-31 interpro_id=IPR003717 interpro_description=Recombination protein O, RecO GO=Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
gwf2_scaffold_3806_8
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(4709..6781)
DNA (2073bp) protein (691aa)
Guanosine polyphosphate pyrophosphohydrolase/synthetase, GTP pyrophosphokinase {ECO:0000313|EMBL:KKT01511.1}; EC=2.7.6.5 {ECO:0000313|EMBL:KKT01511.1};; TaxID=1619068 species="Bacteria; Peregrinibacte
Guanosine polyphosphate pyrophosphohydrolases/synthetases n=2 Tax=Caldanaerobacter subterraneus RepID=Q8RAL8_THETN rbh
SpoT; guanosine polyphosphate pyrophosphohydrolase/synthetase
spoT_relA: RelA/SpoT family protein (db=HMMTigr db_id=TIGR00691 from=12 to=686 evalue=1.8e-176 interpro_id=IPR004811 interpro_description=RelA/SpoT protein GO=Biological Process: guanosine tetraphosphate metabolic process (GO:0015969))
gwf2_scaffold_3806_9
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria

Not on your lists

comp(6893..7888)
DNA (996bp) protein (332aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT19390.1}; TaxID=1619056 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_43_8.;"
seg (db=Seg db_id=seg from=23 to=36)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=84)
gwf2_scaffold_3806_10
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(7912..9054)
DNA (1143bp) protein (381aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase / Phosphopantothenoylcysteine synthetase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CRL1_9CLOT
seg (db=Seg db_id=seg from=354 to=365)
gwf2_scaffold_3806_11
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(9051..9755)
DNA (705bp) protein (235aa)
panC; pantoate--beta-alanine ligase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] Tax=PER_GWF2_43_17
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase n=8 Tax=Thermotoga RepID=PANC_THEP1
PANTOATE-BETA-ALANINE LIGASE (db=HMMPanther db_id=PTHR21299:SF1 from=5 to=234 evalue=1.7e-102 interpro_id=IPR003721 interpro_description=Pantoate-beta-alanine ligase GO=Molecular Function: pantoate-beta-alanine ligase activity (GO:0004592), Biological Process: pantothenate biosynthetic process (GO:0015940))
gwf2_scaffold_3806_12
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(9797..10765)
DNA (969bp) protein (323aa)
RhuM n=5 Tax=Coxiella burnetii RepID=A9KCJ8_COXBN rbh
death-on-curing family protein Tax=PER_GWF2_43_17
death-on-curing family protein
seg (db=Seg db_id=seg from=289 to=304)
gwf2_scaffold_3806_13
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(10749..11501)
DNA (753bp) protein (251aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=PER_GWF2_43_17
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=3 Tax=Desulfovibrio vulgaris RepID=PANB_DESVH
3-methyl-2-oxobutanoate hydroxymethyltransferase (db=HMMPIR db_id=PIRSF000388 from=1 to=247 evalue=1.2e-98 interpro_id=IPR003700 interpro_description=Ketopantoate hydroxymethyltransferase GO=Molecular Function: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity (GO:0003864), Biological Process: pantothenate biosynthetic process (GO:0015940))
gwf2_scaffold_3806_14
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(11513..12121)
DNA (609bp) protein (203aa)
seg Tax=PER_GWF2_43_17
seg (db=Seg db_id=seg from=167 to=184)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
gwf2_scaffold_3806_15
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(12154..12960)
DNA (807bp) protein (269aa)
pantothenate kinase; K09680 type II pantothenate kinase [EC:2.7.1.33] Tax=PER_GWF2_43_17
ATPase BadF/BadG/BcrA/BcrD type n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L7B5_KORCO
pantothenate kinase
seg (db=Seg db_id=seg from=114 to=128)
gwf2_scaffold_3806_16
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(12975..13214)
DNA (240bp) protein (80aa)
Tax=PER_GWF2_43_17
gwf2_scaffold_3806_17
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(13321..15393)
DNA (2073bp) protein (691aa)
hppA; pyrophosphate-energized proton pump; K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=PER_GWF2_43_17
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KUW2_METHD rbh
vacuolar-type H(+)-translocating pyrophosphatase
seg (db=Seg db_id=seg from=3 to=26)
gwf2_scaffold_3806_18
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists


comp(15510..16199)
DNA (690bp) protein (230aa)
50S ribosomal protein L25 n=1 Tax=Staphylococcus massiliensis S46 RepID=K9AU82_9STAP
rplY; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 Tax=PER_GWF2_43_17
rplY; 50S ribosomal protein L25
seg (db=Seg db_id=seg from=205 to=229)
gwf2_scaffold_3806_19
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

16325..16624
DNA (300bp) protein (100aa)
seg Tax=PER_GWF2_43_17
seg (db=Seg db_id=seg from=12 to=23)
no description (db=Gene3D db_id=G3DSA:3.30.1310.10 from=1 to=93 evalue=1.8e-07 interpro_id=IPR004401 interpro_description=Uncharacterised protein family UPF0133)
(db=HMMPfam db_id=PF02575 from=7 to=93 evalue=7.9e-15 interpro_id=IPR004401 interpro_description=Uncharacterised protein family UPF0133)
gwf2_scaffold_3806_20
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

16621..17610
DNA (990bp) protein (330aa)
Aminodeoxychorismate lyase n=1 Tax=Thermincola potens (strain JR) RepID=D5X825_THEPJ
Aminodeoxychorismate lyase, UPF0755 protein {ECO:0000313|EMBL:KKT01523.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
aminodeoxychorismate lyase
seg (db=Seg db_id=seg from=11 to=20)
Displaying 20 items

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