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GD18-4_B1_scaffold_859186

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GD18-4_B1_scaffold_859186_1
R_OD1_Yanofskybacteria_39_10, Yanofskybacteria, Parcubacteria, Bacteria

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3..419
DNA (417bp) protein (139aa)
fic; Fic family protein id=5097868 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
filamentation induced by cAMP protein fic
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_39_10_curated
GD18-4_B1_scaffold_859186_2
GWF2_OD1_42_19, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

863..1363
DNA (501bp) protein (167aa)
TspO and MBR like protein {ECO:0000313|EMBL:KKS48127.1}; TaxID=1618659 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWF2_42_19.;"
TspO and MBR like protein id=1912297 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
hypothetical protein
GD18-4_B1_scaffold_859186_3
CG_CPR14_01, CG_CPR14, Bacteria

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comp(1623..2396)
DNA (774bp) protein (258aa)
Tax=CG_CPR14_01
GD18-4_B1_scaffold_859186_4
CG_CPR14_01, CG_CPR14, Bacteria

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comp(2410..3042)
DNA (633bp) protein (211aa)
RNA polymerase sigma factor SigW, putative; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=1241643 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
RNA polymerase sigma factor SigW
Tax=CG_CPR14_01
GD18-4_B1_scaffold_859186_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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3156..3803
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QYM8_PIRSD id=5103480 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=RBG_13_Pacearchaeota_36_9_curated
GD18-4_B1_scaffold_859186_6
unknown

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3934..4461
DNA (528bp) protein (176aa)

This feature has no annotations

GD18-4_B1_scaffold_859186_7
Pelodictyon luteolum, Pelodictyon, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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4555..5283
DNA (729bp) protein (243aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=319225 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.;" source="Pelodictyon luteolum (strain DSM 273) (Chlorobium luteolum (strain DSM; 273)).;"
Pseudouridine synthase n=1 Tax=Pelodictyon luteolum (strain DSM 273) RepID=Q3B289_PELLD
pseudouridine synthase
GD18-4_B1_scaffold_859186_8
R_SM2F11_46_24, SM2F11, Bacteria

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comp(5392..6621)
DNA (1230bp) protein (410aa)
ATP-dependent RNA helicase protein id=2169559 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
ATP-dependent RNA helicase RhlE
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_24_curated
GD18-4_B1_scaffold_859186_9
R_RIF_OD1_09_54_12, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

6797..6994
DNA (198bp) protein (66aa)
cold-shock protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037364D4
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_09_54_12_curated
GD18-4_B1_scaffold_859186_10
GWA2_OD1_39_41, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

7474..7740
DNA (267bp) protein (89aa)
Virulence protein RhuM n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7V2J4_DESML
Putative Death-on-curing family protein {ECO:0000313|EMBL:KKR21727.1}; TaxID=1618695 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWA2_39_41.;"
hypothetical protein
GD18-4_B1_scaffold_859186_11
R_OD1_48_18, Parcubacteria, Bacteria

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7839..9641
DNA (1803bp) protein (601aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1Z3G5_9BACT
GTP-binding protein TypA
Tax=RIFCSPLOWO2_01_FULL_OD1_48_18_curated
GD18-4_B1_scaffold_859186_12
R_OD1_Falkowbacteria_40_23, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

9720..10979
DNA (1260bp) protein (420aa)
Citrate transporter n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXI3_9BACT
citrate transporter
Tax=RIFCSPLOWO2_01_FULL_OD1_Falkowbacteria_40_23_curated
GD18-4_B1_scaffold_859186_13
R_OD1_Magasanikbacteria_51_14, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

11028..11411
DNA (384bp) protein (128aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_51_14_curated
GD18-4_B1_scaffold_859186_14
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

Not on your lists

11952..12650
DNA (699bp) protein (233aa)
Argininosuccinate synthase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) RepID=E9CFJ4_CAPO3
argininosuccinate synthase
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
Displaying 14 items

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