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S_p1_S3_170907_scaffold_16422

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_170907_scaffold_16422_1
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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comp(3..740)
DNA (738bp) protein (246aa)
Asparagine synthetase, glutamine-hydrolyzing {ECO:0000313|EMBL:KKR07411.1}; species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
Asparagine synthetase bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
putative asparagine synthetase, glutamine-hydrolyzing
S_p1_S3_170907_scaffold_16422_2
R_OD1_Azambacteria_40_24, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(718..2118)
DNA (1401bp) protein (467aa)
hypothetical protein Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B2FE6E
dolichyl-phosphate-mannose-protein mannosyltransferase family protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Azambacteria_40_24_curated
S_p1_S3_170907_scaffold_16422_3
Magnetococcus marinus, Magnetococcus, Magnetococcales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2125..2850)
DNA (726bp) protein (242aa)
Glycosyl transferase, family 2 Tax=Magnetococcus sp. (strain MC-1) RepID=A0LBL8_MAGSM
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABK45361.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Magnetococcales; Magnetococcaceae; Magnetococcus.;" source="Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1).;"
S_p1_S3_170907_scaffold_16422_4
RLO_OD1_Magasanikbacteria_43_12, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2847..4175)
DNA (1329bp) protein (443aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Magasanikbacteria_43_12_curated
S_p1_S3_170907_scaffold_16422_5
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(4172..5404)
DNA (1233bp) protein (411aa)
hypothetical protein Tax=Lewinella cohaerens RepID=UPI00037654F4
glycosyl transferase family protein
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
S_p1_S3_170907_scaffold_16422_6
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

comp(5409..6137)
DNA (729bp) protein (243aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YWM1_9BACT
glycosyl transferase
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
S_p1_S3_170907_scaffold_16422_7
R_OD1_Magasanikbacteria_47_8, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6109..7437)
DNA (1329bp) protein (443aa)
Uncharacterized protein bin=GWC2_OD1_43_27 species=Coxiella burnetii genus=Coxiella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Magasanikbacteria_47_8_curated
S_p1_S3_170907_scaffold_16422_8

Not on your lists

comp(7517..8530)
DNA (1014bp) protein (338aa)
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08T30_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KKN28575.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_170907_scaffold_16422_9
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

8614..9150
DNA (537bp) protein (179aa)
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
def; Peptide deformylase (EC:3.5.1.88)
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
S_p1_S3_170907_scaffold_16422_10
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

9147..10100
DNA (954bp) protein (318aa)
methionyl-tRNA formyltransferase Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B34B2C
methionyl-tRNA formyltransferase
Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
S_p1_S3_170907_scaffold_16422_11
R_OD1_Kaiserbacteria_51_21, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10097..13150)
DNA (3054bp) protein (1018aa)
alias=gwe2_scaffold_601_69 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_51_21_curated
S_p1_S3_170907_scaffold_16422_12
R_RIF_OD1_13_52_23, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(13153..13389)
DNA (237bp) protein (79aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_52_23_curated
S_p1_S3_170907_scaffold_16422_13
R_OD1_Giovannonibacteria_45_23, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(13424..14731)
DNA (1308bp) protein (436aa)
alias=gwe2_scaffold_601_69 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Tax=RIFCSPHIGHO2_01_FULL_OD1_Giovannonibacteria_45_23_curated
S_p1_S3_170907_scaffold_16422_14
unknown

Not on your lists

comp(14712..14945)
DNA (234bp) protein (78aa)

This feature has no annotations

S_p1_S3_170907_scaffold_16422_15
R_RIF_OD1_07_49_22b, RIF-OD1-7, Parcubacteria, Bacteria

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comp(15035..15856)
DNA (822bp) protein (274aa)
Endonuclease/exonuclease/phosphatase bin=GWA2_OP3_53_43 species=Pseudomonas fulva genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_49_22b_curated
Displaying 15 items

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