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S_2p5_S6_coassembly_k141_2977386

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_2p5_S6_coassembly_k141_2977386_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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2..205
DNA (204bp) protein (68aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanyl-tRNA synthetase, beta subunit Tax=Candidatus Nitrospira defluvii RepID=D8PAB7_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
S_2p5_S6_coassembly_k141_2977386_2
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

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240..596
DNA (357bp) protein (119aa)
Chain A, Red Copper Protein Nitrosocyanin Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q820S6_NITEU
red copper protein nitrosocyanin subunit A
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
S_2p5_S6_coassembly_k141_2977386_3
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

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comp(759..1121)
DNA (363bp) protein (121aa)
50S ribosomal protein L20 bin=GWC2_Nitrospirae_57_13 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
rplT; 50S ribosomal protein L20
Tax=GWA2_Nitrospirae_42_11_curated
S_2p5_S6_coassembly_k141_2977386_4
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1213..1410)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TVY7_9CLOT
50S ribosomal protein L35
Tax=RBG_16_Desulfobacca_60_12_curated
S_2p5_S6_coassembly_k141_2977386_5
GWA2_RIF03_38_11_curated, RIF3, Bacteria

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comp(1425..1823)
DNA (399bp) protein (133aa)
infC; translation initiation factor IF-3
Translation initiation factor IF-3 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=GWA2_RIF03_38_11_curated
S_2p5_S6_coassembly_k141_2977386_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2006..3991)
DNA (1986bp) protein (662aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase Tax=Candidatus Nitrospira defluvii RepID=D8PAC1_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
S_2p5_S6_coassembly_k141_2977386_trna_1
unknown

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comp(4127..4198)
DNA (72bp)
transferRNA Val
S_2p5_S6_coassembly_k141_2977386_7
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

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comp(4266..4538)
DNA (273bp) protein (91aa)
DNA-binding protein HU 1 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hupA; transcriptional dual regulator HU-alpha
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
S_2p5_S6_coassembly_k141_2977386_8
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

comp(4741..5052)
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PAC3_9BACT
hypothetical protein
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
S_2p5_S6_coassembly_k141_2977386_9
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(5166..6779)
DNA (1614bp) protein (538aa)
Chaperone bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
ATP-dependent chaperone ClpB
Tax=GWC2_Nitrospirae_56_14_curated
Displaying 10 items

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