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S_2p5_S6_coassembly_k141_3050729

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_2p5_S6_coassembly_k141_3050729_1

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comp(3..473)
DNA (471bp) protein (157aa)
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:AGC72147.1}; EC=6.1.1.2 {ECO:0000313|EMBL:AGC72147.1};; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_560.;"
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase Tax=uncultured bacterium A1Q1_fos_560 RepID=L7VSR2_9BACT
S_2p5_S6_coassembly_k141_3050729_2
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

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comp(512..1237)
DNA (726bp) protein (242aa)
Peptidase M50 bin=GWC2_Proteo_65_14_Ab886 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
membrane protein
Tax=GWA2_Nitrospirae_42_11_curated
S_2p5_S6_coassembly_k141_3050729_3
R_Nitrospirae_66_17, Nitrospirae, Bacteria

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comp(1251..3170)
DNA (1920bp) protein (640aa)
Putative Extracellular ligand-binding receptor Tax=Candidatus Nitrospira defluvii RepID=D8PIG5_9BACT
putative extracellular ligand-binding receptor
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
S_2p5_S6_coassembly_k141_3050729_4
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3314..4201
DNA (888bp) protein (296aa)
Tyrosine recombinase XerD Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LSM9_SYNAS
integrase/recombinase
Tax=RBG_16_Deltaproteobacteria_50_11_curated
S_2p5_S6_coassembly_k141_3050729_5
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4233..4613)
DNA (381bp) protein (127aa)
Putative PAS/PAC sensor protein bin=GWC2_Deltaproteobacteria_55_46 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
two component, sigma54 specific, Fis family transcriptional regulator
Tax=RBG_13_Deltaproteobacteria_61_14_curated
S_2p5_S6_coassembly_k141_3050729_6
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

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comp(4660..5187)
DNA (528bp) protein (176aa)
Peptidyl-prolyl cis-trans isomerase bin=GWC2_Methylomirabilis_70_16 species=Mariprofundus ferrooxydans genus=Mariprofundus taxon_order=Mariprofundales taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ppiB; peptidyl prolyl cis-trans isomerase (rotamase B)
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
S_2p5_S6_coassembly_k141_3050729_7
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

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comp(5201..6175)
DNA (975bp) protein (325aa)
putative exopolyphosphatase (EC:3.6.1.11)
Exopolyphosphatase Tax=Candidatus Nitrospira defluvii RepID=B3U4J9_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
S_2p5_S6_coassembly_k141_3050729_8
unknown

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comp(6172..6504)
DNA (333bp) protein (111aa)

This feature has no annotations

S_2p5_S6_coassembly_k141_3050729_9
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

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comp(6664..9198)
DNA (2535bp) protein (845aa)
recG; ATP-dependent DNA helicase (EC:3.6.1.-)
ATP-dependent DNA helicase RecG bin=GWC2_Nitrospirae_57_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=GWC2_Nitrospirae_57_9_curated
S_2p5_S6_coassembly_k141_3050729_10
Peptostreptococcaceae bacterium AS15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9368..9559
DNA (192bp) protein (64aa)
50S ribosomal protein L28 Tax=Clostridiales RepID=E0QJT7_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium AS15.;"
50S ribosomal protein L28
S_2p5_S6_coassembly_k141_3050729_11
RLO_PLX_64_10, Bacteria

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9681..10649
DNA (969bp) protein (323aa)
Putative magnesium and cobalt transport protein Tax=uncultured Acidobacteria bacterium RepID=Q7X2U8_9BACT
magnesium and cobalt transport protein CorA
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
S_2p5_S6_coassembly_k141_3050729_12
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(10676..11458)
DNA (783bp) protein (261aa)
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
S_2p5_S6_coassembly_k141_3050729_13
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

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comp(11533..13500)
DNA (1968bp) protein (656aa)
Adenylate/guanylate cyclase with Chase sensor bin=GWB2_Nitrospirae_rel_47_37 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
CHASE2 sensor adenylate/guanylate cyclase
Tax=RBG_13_Nitrospirae_39_12_curated
Displaying 13 items

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