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S_2p5_S6_coassembly_k141_5166051

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_2p5_S6_coassembly_k141_5166051_1
RBG_16_Nitrospirae_43_11_curated, Nitrospirae, Bacteria

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2..793
DNA (792bp) protein (264aa)
Uncharacterized protein Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JM65_9GAMM
cytochrome c-type biogenesis protein CcmI
Tax=RBG_16_Nitrospirae_43_11_curated
S_2p5_S6_coassembly_k141_5166051_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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865..1413
DNA (549bp) protein (183aa)
Thiol-disulfide oxidoreductase resA Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC7B
resA2; thiol-disulfide oxidoreductase ResA
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
S_2p5_S6_coassembly_k141_5166051_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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1416..2162
DNA (747bp) protein (249aa)
Cytochrome c biogenesis protein CcdA Tax=Candidatus Nitrospira defluvii RepID=D8PBK8_9BACT
ccdA; cytochrome c biogenesis protein CcdA
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
S_2p5_S6_coassembly_k141_5166051_4
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

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2169..3266
DNA (1098bp) protein (366aa)
Endopeptidase bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
degP-1; periplasmic trypsin-like serine protease DegP
Tax=CG_Delta_01
S_2p5_S6_coassembly_k141_5166051_5

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3392..3976
DNA (585bp) protein (195aa)
rnhC; ribonuclease HIII (fragment) (EC:3.1.26.4)
Ribonuclease Tax=Candidatus Nitrospira defluvii RepID=D8PBZ5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN52324.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_2p5_S6_coassembly_k141_5166051_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(3933..4700)
DNA (768bp) protein (256aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PBZ4_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
S_2p5_S6_coassembly_k141_5166051_trna_3
unknown

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comp(4731..4803)
DNA (73bp)
transferRNA Ile
S_2p5_S6_coassembly_k141_5166051_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(4853..6676)
DNA (1824bp) protein (608aa)
RNA polymerase sigma factor SigA Tax=Candidatus Nitrospira defluvii RepID=D8PBZ3_9BACT
rpoD; RNA polymerase sigma factor RpoD (Sigma-70)
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
S_2p5_S6_coassembly_k141_5166051_8
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

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comp(6773..8569)
DNA (1797bp) protein (599aa)
dnaG; DNA primase (EC:2.7.7.-)
DNA primase bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
S_2p5_S6_coassembly_k141_5166051_9
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(8661..9119)
DNA (459bp) protein (153aa)
Uncharacterized protein YqeY Tax=Geobacter metallireducens RepID=Q39YN9_GEOMG
glutamyl-tRNA amidotransferase
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
S_2p5_S6_coassembly_k141_5166051_10
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

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9312..9716
DNA (405bp) protein (135aa)
RNA polymerase-binding protein DksA bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
putative RNA polymerase-binding protein DksA
Tax=GWA2_Nitrospirae_42_11_curated
S_2p5_S6_coassembly_k141_5166051_trna_2
unknown

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comp(9724..9795)
DNA (72bp)
transferRNA Val
S_2p5_S6_coassembly_k141_5166051_11
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9983..10696
DNA (714bp) protein (238aa)
FKBP-type peptidyl-prolyl cis-trans isomerase; K03773 FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] bin=bin5_DeltaP species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
FKBP-type peptidylprolyl cis-trans isomerase
Tax=RBG_16_Deltaproteobacteria_50_11_curated
S_2p5_S6_coassembly_k141_5166051_12
unknown

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comp(10879..11409)
DNA (531bp) protein (177aa)

This feature has no annotations

S_2p5_S6_coassembly_k141_5166051_trna_1
unknown

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comp(11783..11854)
DNA (72bp)
transferRNA Gly
Displaying 15 items

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