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S_p1_S3_coassembly_k141_228456

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_228456_1
unknown

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167..391
DNA (225bp) protein (75aa)

This feature has no annotations

S_p1_S3_coassembly_k141_228456_2

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388..753
DNA (366bp) protein (122aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Archaea.;" source="archaeon GW2011_AR17.;"
Ribonuclease VapC Tax=Thermococcus sp. AM4 RepID=B7R4R9_9EURY
PIN domain-containing protein
S_p1_S3_coassembly_k141_228456_3
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(1066..1641)
DNA (576bp) protein (192aa)
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K01802 peptidylprolyl isomerase [EC:5.2.1.8] bin=OD1_GWC2_34_28 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptidyl-prolyl cis-trans isomerase
Tax=CG_Pacearch_03
S_p1_S3_coassembly_k141_228456_4
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1638..2747)
DNA (1110bp) protein (370aa)
Type 2 DNA topoisomerase 6 subunit A bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Type 2 DNA topoisomerase 6 subunit A
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_228456_5

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comp(2755..4536)
DNA (1782bp) protein (594aa)
Type 2 DNA topoisomerase 6 subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00322};; Type II DNA topoisomerase VI subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; species="Archaea.;" source="archaeon GW2011_AR9.;"
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA topoisomerase VI, subunit B
S_p1_S3_coassembly_k141_228456_6
RBG_13_KAZAN_50_9_curated, Kazan, Bacteria

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4748..5377
DNA (630bp) protein (210aa)
uncharacterized LOC101215456 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
Tax=RBG_13_KAZAN_50_9_curated
S_p1_S3_coassembly_k141_228456_7
Nautilia profundicola, Nautilia, Nautiliales, Epsilonproteobacteria, Proteobacteria, Bacteria

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5374..6060
DNA (687bp) protein (229aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Nautiliales; Nautiliaceae; Nautilia.;" source="Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH).;"
7-carboxy-7-deazaguanine synthase Tax=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) RepID=B9L874_NAUPA
radical SAM domain protein
S_p1_S3_coassembly_k141_228456_8
GWA1_OP11_47_20, Amesbacteria, Microgenomates, Bacteria

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comp(6029..6649)
DNA (621bp) protein (207aa)
Phosphatase YihX {ECO:0000313|EMBL:KKU69112.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA1_47_20.;"
putative hydrolase; K07025 putative hydrolase of the HAD superfamily bin=ACD61 species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=ACD61 organism_group=OP11 (Microgenomates) organism_desc=OP11
yihX; phosphatase yihX
S_p1_S3_coassembly_k141_228456_9

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comp(6685..7218)
DNA (534bp) protein (178aa)
KH domain protein bin=GWC2_Clostridiales_40_7 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
Uncharacterized protein {ECO:0000313|EMBL:KHO50184.1}; species="Archaea.;" source="archaeon GW2011_AR9.;"
KH domain protein
S_p1_S3_coassembly_k141_228456_10
AR9, Woesearchaeaota, DPANN, Archaea

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comp(7218..7955)
DNA (738bp) protein (246aa)
serine/threonine protein kinase (EC:2.7.11.-); K07178 RIO kinase 1 [EC:2.7.11.1] bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Serine/threonine protein kinase involved in cell cycle control (EC:2.7.11.1)
Tax=AR9
S_p1_S3_coassembly_k141_228456_11
unknown

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comp(7989..8510)
DNA (522bp) protein (174aa)

This feature has no annotations

S_p1_S3_coassembly_k141_228456_12

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9250..10608
DNA (1359bp) protein (453aa)
DNA primase DnaG {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020821}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00007, ECO:0000256|SAAS:SAAS00020820};; species="Archaea.;" source="archaeon GW2011_AR9.;"
DNA primase bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
S_p1_S3_coassembly_k141_228456_13

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11364..12707
DNA (1344bp) protein (448aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50190.1}; species="Archaea.;" source="archaeon GW2011_AR9.;"
hypothetical protein; K06915 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
S_p1_S3_coassembly_k141_228456_14
unknown

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comp(13203..14390)
DNA (1188bp) protein (396aa)

This feature has no annotations

S_p1_S3_coassembly_k141_228456_15
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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14785..16572
DNA (1788bp) protein (596aa)
Probable translation initiation factor IF-2 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
InfB_2; translation initiation factor IF-2
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
S_p1_S3_coassembly_k141_228456_16
Eucalyptus grandis, Eucalyptus, Myrtales, rosids, Streptophyta, Viridiplantae

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comp(16573..18180)
DNA (1608bp) protein (536aa)
Non-specific serine/threonine protein kinase {ECO:0000256|SAAS:SAAS00027859}; EC=2.7.11.1 {ECO:0000256|SAAS:SAAS00027859};; species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Eucalyptus.;" source="Eucalyptus grandis (Flooded gum).;"
Serine/threonine protein kinase with WD40 repeats Tax=bacterium Ellin514 RepID=B9XMI9_9BACT bin=ACD79 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
serine/threonine protein kinase with WD40 repeats
S_p1_S3_coassembly_k141_228456_17
AR9, Woesearchaeaota, DPANN, Archaea

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18256..18732
DNA (477bp) protein (159aa)
Putative uncharacterized protein bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR9
S_p1_S3_coassembly_k141_228456_18
AR9, Woesearchaeaota, DPANN, Archaea

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18863..19537
DNA (675bp) protein (225aa)
Tax=AR9
S_p1_S3_coassembly_k141_228456_19
AR9, Woesearchaeaota, DPANN, Archaea

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comp(19743..19970)
DNA (228bp) protein (76aa)
id=5800009 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=AR9
S_p1_S3_coassembly_k141_228456_20
R_OD1_Uhrbacteria_47_17, Uhrbacteria, Parcubacteria, Bacteria

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20025..21059
DNA (1035bp) protein (345aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2BYE6_9BACT
putative uncharacterized protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Uhrbacteria_47_17_curated
S_p1_S3_coassembly_k141_228456_21
unknown

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21181..21558
DNA (378bp) protein (126aa)

This feature has no annotations

S_p1_S3_coassembly_k141_228456_22
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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21552..22007
DNA (456bp) protein (152aa)
lspA; signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L029_THERP
Tax=RBG_16_Chloroflexi_68_14_curated
S_p1_S3_coassembly_k141_228456_23
R_WWE3_53_14, WWE3, Bacteria

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22129..22674
DNA (546bp) protein (182aa)
hypothetical protein Tax=Legionella tunisiensis RepID=UPI00030F8C3B
methyltransferase
Tax=RIFCSPLOWO2_01_FULL_WWE3_53_14_curated
S_p1_S3_coassembly_k141_228456_24
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(22698..23324)
DNA (627bp) protein (209aa)
Extracellular nuclease Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WRM0_METH6
Extracellular nuclease
Tax=RBG_13_Woesearchaeota_36_6_curated
S_p1_S3_coassembly_k141_228456_25
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

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comp(23438..23773)
DNA (336bp) protein (112aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035F5946
csaA; export chaperone protein CsaA
Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
S_p1_S3_coassembly_k141_228456_26
AR18, Woesearchaeaota, DPANN, Archaea

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comp(23871..24191)
DNA (321bp) protein (107aa)
translation initiation factor eIF-1A; K03236 translation initiation factor 1A bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Translation initiation factor 1A
Tax=AR18
S_p1_S3_coassembly_k141_228456_27
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24476..25009)
DNA (534bp) protein (178aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
Uncharacterized protein Tax=Roseburia inulinivorans CAG:15 RepID=R5HWI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29122.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
S_p1_S3_coassembly_k141_228456_28

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25134..25955
DNA (822bp) protein (274aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50197.1}; species="Archaea.;" source="archaeon GW2011_AR9.;"
Putative uncharacterized protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
S_p1_S3_coassembly_k141_228456_29
AR9, Woesearchaeaota, DPANN, Archaea

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comp(25987..26865)
DNA (879bp) protein (293aa)
Uncharacterized membrane protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=AR9
S_p1_S3_coassembly_k141_228456_30
unknown

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27208..27732
DNA (525bp) protein (175aa)

This feature has no annotations

Displaying items 1-30 of 52 in total

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