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S_p1_S3_coassembly_k141_675024

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_675024_1

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269..991
DNA (723bp) protein (241aa)
id=5047476 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO45294.1}; species="Archaea.;" source="archaeon GW2011_AR4.;"
S_p1_S3_coassembly_k141_675024_2
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(995..1765)
DNA (771bp) protein (257aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D2195
transcriptional regulator TrmB
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p1_S3_coassembly_k141_675024_3
unknown

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1842..2726
DNA (885bp) protein (295aa)

This feature has no annotations

S_p1_S3_coassembly_k141_675024_4
unknown

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comp(2649..2900)
DNA (252bp) protein (84aa)

This feature has no annotations

S_p1_S3_coassembly_k141_675024_5

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comp(2950..3180)
DNA (231bp) protein (77aa)
Sm ribonucleoprotein-like protein; K04796 small nuclear ribonucleoprotein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Small nuclear ribonucleoprotein {ECO:0000313|EMBL:KHO45268.1}; species="Archaea.;" source="archaeon GW2011_AR4.;"
Like-Sm ribonucleoprotein core
S_p1_S3_coassembly_k141_675024_6
unknown

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comp(3328..3468)
DNA (141bp) protein (47aa)

This feature has no annotations

S_p1_S3_coassembly_k141_675024_7
CG_Woesearch_02, Woesearchaeota, Archaea

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3518..4108
DNA (591bp) protein (197aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003627A1D
haloacid dehalogenase
Tax=CG_Woesearch_02
S_p1_S3_coassembly_k141_675024_8
unknown

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comp(4064..4909)
DNA (846bp) protein (282aa)

This feature has no annotations

S_p1_S3_coassembly_k141_675024_9
unknown

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comp(4899..5747)
DNA (849bp) protein (283aa)

This feature has no annotations

S_p1_S3_coassembly_k141_675024_10
R_RIF_OD1_06_42_22, RIF-OD1-6, Parcubacteria, Bacteria

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5847..6446
DNA (600bp) protein (200aa)
Ser/Thr protein phosphatase family protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Metallophosphoesterase
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_42_22_curated
S_p1_S3_coassembly_k141_675024_11
unknown

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6412..7764
DNA (1353bp) protein (451aa)

This feature has no annotations

S_p1_S3_coassembly_k141_675024_12
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7796..8326)
DNA (531bp) protein (177aa)
Uncharacterized protein {ECO:0000313|EMBL:KGS08074.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei ABCPW 111.;"
S_p1_S3_coassembly_k141_675024_13
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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8532..8966
DNA (435bp) protein (145aa)
hypothetical protein Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI0003653A59
Uncharacterized protein {ECO:0000313|EMBL:KHE93783.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
phage antirepressor protein
S_p1_S3_coassembly_k141_675024_14
unknown

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9006..9137
DNA (132bp) protein (44aa)

This feature has no annotations

S_p1_S3_coassembly_k141_675024_15
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(9165..10919)
DNA (1755bp) protein (585aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:AEG19033.1}; EC=1.1.5.2 {ECO:0000313|EMBL:AEG19033.1};; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1).;"
Quinoprotein glucose dehydrogenase Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D1W1_METSW
S_p1_S3_coassembly_k141_675024_16
unknown

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comp(11028..11273)
DNA (246bp) protein (82aa)

This feature has no annotations

S_p1_S3_coassembly_k141_675024_17

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11316..12323
DNA (1008bp) protein (336aa)
glycosyl transferase family protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Glycosyl transferase family protein {ECO:0000313|EMBL:KHO45367.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S_p1_S3_coassembly_k141_675024_18
unknown

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comp(12318..12596)
DNA (279bp) protein (93aa)

This feature has no annotations

S_p1_S3_coassembly_k141_675024_19
Bacillus ginsengihumi, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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12644..13456
DNA (813bp) protein (271aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus ginsengihumi.;"
Pseudouridine synthase Tax=Bacillus coagulans 36D1 RepID=G2TL15_BACCO
pseudouridine synthase
S_p1_S3_coassembly_k141_675024_20
AR4, Woesearchaeaota, DPANN, Archaea

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13678..14910
DNA (1233bp) protein (411aa)
putative Na(+)/H(+) antiporter bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
transporter, CPA2 family
Tax=AR4
S_p1_S3_coassembly_k141_675024_21

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comp(15030..15443)
DNA (414bp) protein (138aa)
HIT-like 8..136 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE27922.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
S_p1_S3_coassembly_k141_675024_22
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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15744..16097
DNA (354bp) protein (118aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003763F0C
alpha-L-glutamate ligase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
S_p1_S3_coassembly_k141_675024_23
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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16094..17170
DNA (1077bp) protein (359aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003820E23
RimK family alpha-L-glutamate ligase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
S_p1_S3_coassembly_k141_675024_24
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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comp(17343..17651)
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Salimicrobium sp. MJ3 RepID=K2GNT0_9BACI
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
S_p1_S3_coassembly_k141_675024_25
AR17, Woesearchaeaota, DPANN, Archaea

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comp(17685..18200)
DNA (516bp) protein (172aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FEE17
hypothetical protein
Tax=AR17
S_p1_S3_coassembly_k141_675024_26

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comp(18232..18768)
DNA (537bp) protein (179aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FEE17
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62486.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_675024_27
AR9, Woesearchaeaota, DPANN, Archaea

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comp(18808..19674)
DNA (867bp) protein (289aa)
Sugar kinase, YjeF-related protein family bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
carbohydrate kinase
Tax=AR9
Displaying 27 items

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