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S_p1_S3_coassembly_k141_441195

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_441195_1
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..451)
DNA (450bp) protein (150aa)
Chromosome undetermined scaffold_38, whole genome shotgun sequence Tax=Paramecium tetraurelia RepID=A0D550_PARTE
Uncharacterized protein {ECO:0000313|EMBL:AIA54081.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
hypothetical protein
S_p1_S3_coassembly_k141_441195_2
unknown

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comp(458..2008)
DNA (1551bp) protein (517aa)

This feature has no annotations

S_p1_S3_coassembly_k141_441195_3
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


comp(2288..4732)
DNA (2445bp) protein (815aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A Tax=uncultured bacterium RepID=K2DAM6_9BACT
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_441195_4
GWA2_OP11_nov_40_16, Levybacteria, Microgenomates, Bacteria

Not on your lists

4824..5996
DNA (1173bp) protein (391aa)
Major Facilitator Superfamily transporter Tax=Clostridium pasteurianum BC1 RepID=R4K9X8_CLOPA
MFS superfamily transporter protein {ECO:0000313|EMBL:KKR49408.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWA2_40_16.;"
Major Facilitator Superfamily transporter
S_p1_S3_coassembly_k141_441195_5
R_OP11_Daviesbacteria_41_32, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(5993..6607)
DNA (615bp) protein (205aa)
putative Peptide deformylase (EC:3.5.1.88)
Peptide deformylase Tax=Candidatus Saccharimonas aalborgensis RepID=R4PVM8_9BACT
Tax=RIFCSPLOWO2_01_FULL_OP11_Daviesbacteria_41_32_curated
S_p1_S3_coassembly_k141_441195_6
R_OP11_Daviesbacteria_39_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

6632..7786
DNA (1155bp) protein (385aa)
D-alanine--D-alanine ligase Tax=Caloramator australicus RC3 RepID=I7K836_9CLOT
DdlA2; D-alanine--D-alanine ligase
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_39_12_curated
S_p1_S3_coassembly_k141_441195_7
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(7783..9243)
DNA (1461bp) protein (487aa)
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (Fragment) Tax=uncultured bacterium RepID=K2CXY2_9BACT
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_441195_8
R_OP11_Daviesbacteria_39_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(9215..9958)
DNA (744bp) protein (248aa)
Alpha/beta superfamily hydrolase/acyltransferase Tax=uncultured bacterium RepID=K2CCD7_9BACT
MhpC4; alpha/beta hydrolase
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_39_12_curated
S_p1_S3_coassembly_k141_441195_9
R_OP11_Daviesbacteria_39_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(9960..11306)
DNA (1347bp) protein (449aa)
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9); K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_39_12_curated
S_p1_S3_coassembly_k141_441195_10
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

11328..12125
DNA (798bp) protein (266aa)
murI; glutamate racemase (EC:5.1.1.3)
Glutamate racemase Tax=uncultured bacterium RepID=K2D876_9BACT
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
S_p1_S3_coassembly_k141_441195_11
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(12106..13443)
DNA (1338bp) protein (446aa)
UDP-N-acetylmuramate-L-alanine ligase Tax=uncultured bacterium RepID=K2DSP6_9BACT
murC; UDP-N-acetylmuramate-alanine ligase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_441195_12
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(13444..14511)
DNA (1068bp) protein (356aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CAC5_9BACT
Phosphoserine aminotransferase {ECO:0000313|EMBL:KKQ83329.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_7.;"
phosphoserine aminotransferase
S_p1_S3_coassembly_k141_441195_13
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(14551..17796)
DNA (3246bp) protein (1082aa)
DNA gyrase subunit B Tax=Microcystis RepID=I4FE44_MICAE bin=GWF1_OP11_31_35_complete species=unknown genus=Microcystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
DNA gyrase subunit B
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_441195_14
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(17825..18472)
DNA (648bp) protein (216aa)
putative DNA polymerase III, delta' subunit (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
DNA polymerase III subunit delta'
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_441195_15
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

18563..20272
DNA (1710bp) protein (570aa)
aar:Acear_1774 type II secretion system protein E (GspE); K02652 type IV pilus assembly protein PilB bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_441195_16
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

20290..21327
DNA (1038bp) protein (346aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2BY98_9BACT
pilT; twitching motility protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_441195_17
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

21332..22534
DNA (1203bp) protein (401aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2E6T2_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_441195_18
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

22625..23179
DNA (555bp) protein (185aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2DHS1_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_441195_19

Not on your lists

23203..24102
DNA (900bp) protein (300aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2F388_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE05255.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
tfpP; aspartate peptidase
S_p1_S3_coassembly_k141_441195_20
R_OP11_Daviesbacteria_39_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

24157..24588
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2DJU9_9BACT
putative General secretion pathway protein GspG
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_39_12_curated
S_p1_S3_coassembly_k141_441195_21
RHI_OP11_Daviesbacteria_37_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

24612..25103
DNA (492bp) protein (164aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2DJF3_9BACT
General secretion pathway protein G
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_11_curated
S_p1_S3_coassembly_k141_441195_22
R_OP11_Daviesbacteria_39_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

25124..25687
DNA (564bp) protein (188aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2F4Z3_9BACT
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_39_12_curated
S_p1_S3_coassembly_k141_441195_23
R_OP11_Daviesbacteria_39_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

25677..26234
DNA (558bp) protein (186aa)
hypothetical protein bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_39_12_curated
S_p1_S3_coassembly_k141_441195_24
R_OP11_Levybacteria_36_8, Levybacteria, Microgenomates, Bacteria

Not on your lists

26231..26851
DNA (621bp) protein (207aa)
transmembrane_regions 52..74 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPLOWO2_02_FULL_OP11_Levybacteria_36_8_curated
S_p1_S3_coassembly_k141_441195_25
RHI_OP11_Daviesbacteria_37_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

26946..27842
DNA (897bp) protein (299aa)
transmembrane_regions 7..29 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_11_curated
S_p1_S3_coassembly_k141_441195_26
R_OP11_Daviesbacteria_38_18, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

27845..28246
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CHN1_9BACT
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_38_18_curated
S_p1_S3_coassembly_k141_441195_27
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

28243..28815
DNA (573bp) protein (191aa)
transmembrane_regions 21..43 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_441195_28
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

28812..30590
DNA (1779bp) protein (593aa)
transmembrane_regions 2..24 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_441195_29
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

30636..31679
DNA (1044bp) protein (348aa)
Type IV pilus assembly protein PilM Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSX7_9BACT bin=ACD38 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:KKR15623.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
hypothetical protein
S_p1_S3_coassembly_k141_441195_30
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

31690..32235
DNA (546bp) protein (182aa)
coiled-coil 55..76 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKR15624.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
Displaying items 1-30 of 40 in total

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