ggKbase home page

S_p1_S3_coassembly_k141_155143

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_155143_1
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(3..101)
DNA (99bp) protein (33aa)
tro:trd_1512 valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
Valyl-tRNA synthetase (EC:6.1.1.9)
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_155143_2
unknown

Not on your lists

comp(145..513)
DNA (369bp) protein (123aa)

This feature has no annotations

S_p1_S3_coassembly_k141_155143_3
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists


comp(563..1654)
DNA (1092bp) protein (364aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
O-sialoglycoprotein endopeptidase
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
S_p1_S3_coassembly_k141_155143_4
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

1693..2529
DNA (837bp) protein (279aa)
hypothetical protein bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
S_p1_S3_coassembly_k141_155143_5
unknown

Not on your lists

comp(2539..2724)
DNA (186bp) protein (62aa)

This feature has no annotations

S_p1_S3_coassembly_k141_155143_6
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(2818..3378)
DNA (561bp) protein (187aa)
2'-5' RNA ligase Tax=uncultured bacterium RepID=K2CH90_9BACT
2'-5' RNA ligase
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
S_p1_S3_coassembly_k141_155143_7
R_OP11_Daviesbacteria_41_32, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(3382..4638)
DNA (1257bp) protein (419aa)
ahcY; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YHE1_THEYD
Tax=RIFCSPLOWO2_01_FULL_OP11_Daviesbacteria_41_32_curated
S_p1_S3_coassembly_k141_155143_8
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(4628..5560)
DNA (933bp) protein (311aa)
adoK; adenosine kinase (EC:2.7.1.20); K00856 adenosine kinase [EC:2.7.1.20] bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
ribokinase-like domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_155143_9
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(5576..5980)
DNA (405bp) protein (135aa)
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_155143_10
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(5970..6167)
DNA (198bp) protein (66aa)
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_155143_11
R_OP11_Roizmanbacteria_41_22, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

6260..6784
DNA (525bp) protein (175aa)
NUDIX hydrolase bin=GWA1_ZB2_49_26 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
nudE; ADP-ribose diphosphatase NudE
Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_41_22_curated
S_p1_S3_coassembly_k141_155143_12
S_OP1_64_32, KB1, Bacteria

Not on your lists

comp(6789..7454)
DNA (666bp) protein (222aa)
hypothetical protein Tax=gamma proteobacterium SCGC AAA076-F14 RepID=UPI00036BB2BF
HAD superfamily hydrolase
Tax=S_OP1_64_32
S_p1_S3_coassembly_k141_155143_13
Microgenomates bacterium GW2011_GWA2_39_19, Microgenomates, Bacteria

Not on your lists

7584..7844
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2E5F9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR10785.1}; species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_39_19.;"
S_p1_S3_coassembly_k141_155143_14
R_OP11_Daviesbacteria_38_18, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

7841..8224
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2E773_9BACT
PilT protein domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_38_18_curated
S_p1_S3_coassembly_k141_155143_15
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(8227..10026)
DNA (1800bp) protein (600aa)
VanW family protein Tax=uncultured bacterium RepID=K2CCZ6_9BACT
VanW family protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_155143_16
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

10078..11400
DNA (1323bp) protein (441aa)
extracellular solute-binding protein family 1; K02027 multiple sugar transport system substrate-binding protein bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
family 1 extracellular solute-binding protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_155143_17
R_OP11_Gottesmanbacteria_39_11, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

11397..12146
DNA (750bp) protein (250aa)
GMP synthase-Glutamine amidotransferase domain (EC:6.3.5.2)
Glutamine amidotransferase class-I bin=GWD2_Deltaproteobacteria_55_8 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPHIGHO2_02_FULL_OP11_Gottesmanbacteria_39_11_curated
S_p1_S3_coassembly_k141_155143_18
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

12133..12462
DNA (330bp) protein (110aa)
Protein of hypothetical function DUF34 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2E9N3_9LACO bin=ACD38 species=Lactobacillus ruminis genus=Lactobacillus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKR15932.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
hypothetical protein
S_p1_S3_coassembly_k141_155143_19
R_OP11_Levybacteria_40_58, Levybacteria, Microgenomates, Bacteria

Not on your lists

12462..13388
DNA (927bp) protein (309aa)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_58_curated
S_p1_S3_coassembly_k141_155143_20
GWA2_OP11_42_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

13407..14354
DNA (948bp) protein (316aa)
D-3-phosphoglycerate dehydrogenase Tax=Aerococcus viridans ATCC 11563 RepID=D4YFE0_9LACT bin=ACD12 species=Aerococcus viridans genus=Aerococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Glyoxylate reductase {ECO:0000313|EMBL:KKS71011.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_42_7.;"
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
S_p1_S3_coassembly_k141_155143_21
R_OP11_Curtissbacteria_42_26, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(14532..15308)
DNA (777bp) protein (259aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2CYX4_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Curtissbacteria_42_26_curated
S_p1_S3_coassembly_k141_155143_22
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(15342..16271)
DNA (930bp) protein (310aa)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase Tax=uncultured bacterium RepID=K2DB43_9BACT
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
S_p1_S3_coassembly_k141_155143_23
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

16326..17210
DNA (885bp) protein (295aa)
hypothetical protein bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
S_p1_S3_coassembly_k141_155143_24
R_OP11_Daviesbacteria_41_32, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

17289..17612
DNA (324bp) protein (108aa)
chaperonin Cpn10; K04078 chaperonin GroES bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
molecular chaperone GroES
Tax=RIFCSPLOWO2_01_FULL_OP11_Daviesbacteria_41_32_curated
S_p1_S3_coassembly_k141_155143_25
unknown

Not on your lists

17617..17910
DNA (294bp) protein (98aa)

This feature has no annotations

S_p1_S3_coassembly_k141_155143_26
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

17927..19570
DNA (1644bp) protein (548aa)
brm:Bmur_0204 chaperonin GroEL; K04077 chaperonin GroEL bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
groL; chaperonin GroEL
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
S_p1_S3_coassembly_k141_155143_27
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

19589..19978
DNA (390bp) protein (130aa)
hypothetical protein bin=GWC1_OP11_49_16_COMPLETE species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_155143_28
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

19978..20574
DNA (597bp) protein (199aa)
seg 47..68 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKQ83579.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_7.;"
hypothetical protein
S_p1_S3_coassembly_k141_155143_29
RHI_RIF_OD1_06_38_11, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(20564..21073)
DNA (510bp) protein (170aa)
hypothetical protein bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
peptidase M23
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_06_38_11_curated
S_p1_S3_coassembly_k141_155143_30
R_OP11_Daviesbacteria_36_13, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

21255..22058
DNA (804bp) protein (268aa)
Serine/threonine-protein kinase Tax=Thermococcus sp. AM4 RepID=B7R0L3_9EURY bin=ACD38 species=Thermococcus sp. AM4 genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
PEGA protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_36_13_curated
Displaying items 1-30 of 34 in total

View Taxonomy