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S_p1_S3_coassembly_k141_770592

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_770592_1
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

429..1130
DNA (702bp) protein (234aa)
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_770592_2
unknown

Not on your lists

comp(1464..1751)
DNA (288bp) protein (96aa)

This feature has no annotations

S_p1_S3_coassembly_k141_770592_3
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

1968..2828
DNA (861bp) protein (287aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A4K9_THESM
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_770592_4
RBG_13_Chloroflexi_48_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(2831..3364)
DNA (534bp) protein (178aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036B97E0
hypothetical protein
Tax=RBG_13_Chloroflexi_48_10_curated
S_p1_S3_coassembly_k141_770592_5
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(3384..4142)
DNA (759bp) protein (253aa)
hypothetical protein
GM20855 gene product from transcript GM20855-RA bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_770592_6
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

4199..4402
DNA (204bp) protein (68aa)
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_770592_7
unknown

Not on your lists

4495..4626
DNA (132bp) protein (44aa)

This feature has no annotations

S_p1_S3_coassembly_k141_770592_8
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(4999..5634)
DNA (636bp) protein (212aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K03653 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Tax=RBG_16_Bathyarchaeota_48_13_curated
S_p1_S3_coassembly_k141_770592_9
unknown

Not on your lists

comp(5606..6094)
DNA (489bp) protein (163aa)

This feature has no annotations

S_p1_S3_coassembly_k141_770592_10
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists


comp(6112..6432)
DNA (321bp) protein (107aa)
30S ribosomal protein S10 bin=PER_GWC2_41_7 species=Methanohalobium evestigatum genus=Methanohalobium taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
SSU ribosomal protein S20e (S10p)
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_770592_11
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(6478..7371)
DNA (894bp) protein (298aa)
PfkB domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMK2_NITGG
PfkB domain-containing protein
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_770592_12
R_OP11_Gottesmanbacteria_39_12b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(7430..8038)
DNA (609bp) protein (203aa)
hypothetical protein bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12b_curated
S_p1_S3_coassembly_k141_770592_13
unknown

Not on your lists

comp(8082..8363)
DNA (282bp) protein (94aa)

This feature has no annotations

S_p1_S3_coassembly_k141_770592_14

Not on your lists

8481..8783
DNA (303bp) protein (101aa)
Transcriptional regulator, PadR family (Fragment) Tax=mine drainage metagenome RepID=T1CGR7_9ZZZZ
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EQD66315.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transcriptional regulator PadR family transcriptional regulator
S_p1_S3_coassembly_k141_770592_15
unknown

Not on your lists

8805..9194
DNA (390bp) protein (130aa)

This feature has no annotations

S_p1_S3_coassembly_k141_770592_16
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

9252..9590
DNA (339bp) protein (113aa)
hypothetical protein Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI0003722BAC
cupin domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_770592_17
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(9624..10901)
DNA (1278bp) protein (426aa)
translation elongation factor EF-1 subunit alpha (EC:2.7.7.4)
Elongation factor 1-alpha Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KT47_ARCVS
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_770592_18
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(10959..13121)
DNA (2163bp) protein (721aa)
Elongation factor 2 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=EF2_PYRAB
fus; elongation factor EF-2
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_770592_19
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists


comp(13256..13855)
DNA (600bp) protein (200aa)
30S ribosomal protein S7 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS7_NANEQ bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S7
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_770592_20
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists


comp(13856..14278)
DNA (423bp) protein (141aa)
30S ribosomal protein S12 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YT20_THEON
30S ribosomal protein S12
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_770592_21
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(14278..14700)
DNA (423bp) protein (141aa)
Transcription termination factor NusA Tax=Methanothermobacter thermautotrophicus RepID=O27128_METTH
nusA; transcription elongation factor NusA-like protein
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_770592_22
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(14704..14964)
DNA (261bp) protein (87aa)
50S ribosomal protein L30e Tax=Thermofilum sp. 1910b RepID=S6A5A3_9CREN
LSU ribosomal protein L30e
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_770592_23
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(15011..16129)
DNA (1119bp) protein (373aa)
DNA-directed RNA polymerase, subunit a' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'' Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR7_METFV
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_770592_24
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(16095..18584)
DNA (2490bp) protein (830aa)
DNA-directed RNA polymerase, subunit a' (EC:2.7.7.6)
DNA-directed RNA polymerase Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR8_METFV
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_770592_25
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(18587..20383)
DNA (1797bp) protein (599aa)
DNA-directed RNA polymerase, subunit b' (EC:2.7.7.6)
DNA-directed RNA polymerase Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR9_METFV
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_770592_26
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(20384..21865)
DNA (1482bp) protein (494aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase, beta subunit/140 kD subunit Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QI07_9EURY
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_770592_27

Not on your lists

comp(21868..22110)
DNA (243bp) protein (81aa)
Chromosome undetermined scaffold_113, whole genome shotgun sequence Tax=Paramecium tetraurelia RepID=A0BL34_PARTE
Marine sediment metagenome DNA, contig: S12H4_L00053 {ECO:0000313|EMBL:GAI85543.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DNA-directed RNA polymerase, subunit H
S_p1_S3_coassembly_k141_770592_28
unknown

Not on your lists

22350..22610
DNA (261bp) protein (87aa)

This feature has no annotations

S_p1_S3_coassembly_k141_770592_29
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

22625..22969
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BD85_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII58672.1}; species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides mccartyi CG1.;"
S_p1_S3_coassembly_k141_770592_30
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(23263..24078)
DNA (816bp) protein (272aa)
alias=gwa2_scaffold_521_40 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=AR5
Displaying items 1-30 of 40 in total

View Taxonomy