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S_p1_S3_coassembly_k141_1010107

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1010107_1
Podospora anserina, Podospora, Sordariales, Sordariomycetidae, Ascomycota, Fungi

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comp(1..7302)
DNA (7302bp) protein (2434aa)
Putative uncharacterized protein Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) RepID=F2UC88_SALR5
Uncharacterized protein {ECO:0000313|EMBL:CDP24287.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Lasiosphaeriaceae; Podospora.;" source="Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383); (Pleurage anserina).;"
S_p1_S3_coassembly_k141_1010107_2
unknown

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comp(7829..8335)
DNA (507bp) protein (169aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1010107_3
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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comp(8435..9148)
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CIT4_KOSOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR78923.1}; species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.;" source="Kosmotoga olearia (strain TBF 19.5.1).;"
S_p1_S3_coassembly_k141_1010107_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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9227..9754
DNA (528bp) protein (176aa)
putative nickel-containing superoxide dismutase (EC:1.15.1.1)
Putative nickel-containing superoxide dismutase Tax=Polaribacter irgensii 23-P RepID=A4C131_9FLAO bin=ACD50 species=Polaribacter irgensii genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_16_Euryarchaeota_67_27_curated
S_p1_S3_coassembly_k141_1010107_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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9751..10050
DNA (300bp) protein (100aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2BQP1_9BACT
nickel-type superoxide dismutase maturation protease
Tax=RBG_16_Euryarchaeota_68_13_curated
S_p1_S3_coassembly_k141_1010107_6
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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10085..10330
DNA (246bp) protein (82aa)
Uncharacterized protein Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PU07_METMA
Uncharacterized protein {ECO:0000313|EMBL:AKB82110.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
S_p1_S3_coassembly_k141_1010107_7

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10332..10595
DNA (264bp) protein (88aa)
Addiction module toxin, RelE/StbE family Tax=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) RepID=A9A6H2_METM6
Uncharacterized protein {ECO:0000313|EMBL:KHO49896.1}; species="Archaea.;" source="archaeon GW2011_AR6.;"
hypothetical protein
S_p1_S3_coassembly_k141_1010107_8
unknown

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comp(10792..10932)
DNA (141bp) protein (47aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1010107_9
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

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comp(10969..11484)
DNA (516bp) protein (172aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0002D25994
peptide methionine sulfoxide reductase
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
S_p1_S3_coassembly_k141_1010107_10
unknown

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comp(11487..11780)
DNA (294bp) protein (98aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1010107_11
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(11813..14974)
DNA (3162bp) protein (1054aa)
ribonucleoside-diphosphate reductase alpha chain (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase alpha chain Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N2X9_9ARCH
Ribonucleoside-diphosphate reductase alpha chain {ECO:0000313|EMBL:BAJ46685.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.;"
S_p1_S3_coassembly_k141_1010107_12
RBG_16_OP11_Curtissbacteria_39_7_curated, Curtissbacteria, Microgenomates, Bacteria

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comp(14976..15425)
DNA (450bp) protein (150aa)
nrdR; transcriptional regulator NrdR (EC:2.5.1.-)
Transcriptional repressor nrdR Tax=Peptostreptococcus anaerobius 653-L RepID=D3MRX7_9FIRM bin=ACD57 species=Peptostreptococcus anaerobius genus=Peptostreptococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_16_OP11_Curtissbacteria_39_7_curated
S_p1_S3_coassembly_k141_1010107_13
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(15577..16170)
DNA (594bp) protein (198aa)
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
30S ribosomal protein S2
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_1010107_14
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(16205..17065)
DNA (861bp) protein (287aa)
Glucose permease Tax=Carnobacterium sp. (strain 17-4) RepID=F4BLZ9_CARS1
glcU; glucose permease
Tax=RBG_16_Thaumarchaeota_49_8_curated
S_p1_S3_coassembly_k141_1010107_15
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(17069..17866)
DNA (798bp) protein (266aa)
hypothetical protein; K07159 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
3-isopropylmalate dehydratase
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_1010107_16
R_OP11_Curtissbacteria_41_11, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(17905..18798)
DNA (894bp) protein (298aa)
Putative membrane protein, DUF6 family Tax=uncultured bacterium RepID=K2A5C6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_OP11_Curtissbacteria_41_11_curated
S_p1_S3_coassembly_k141_1010107_17
unknown

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18898..19116
DNA (219bp) protein (73aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1010107_18
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(19271..20038)
DNA (768bp) protein (256aa)
Translation initiation factor 2 subunit alpha bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
translation initiation factor IF-2
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_1010107_19
Plasmodium falciparum, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

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20099..21022
DNA (924bp) protein (308aa)
Uncharacterized protein PF11_0207 Tax=Plasmodium falciparum (isolate 3D7) PF05_PLAF7">RepID=YPF05_PLAF7
Uncharacterized protein PF11_0207; species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).;" source="Plasmodium falciparum (isolate 3D7).;"
S_p1_S3_coassembly_k141_1010107_20
unknown

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21015..21263
DNA (249bp) protein (83aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1010107_21

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21298..22068
DNA (771bp) protein (257aa)
Zinc/iron permease bin=GWC1_OD1_38_17 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Zinc/iron permease {ECO:0000313|EMBL:KKP97612.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_36_17.;"
zinc/iron permease
S_p1_S3_coassembly_k141_1010107_22
RIFOXYD1_FULL_OD1_Magasanikbacteria_40_23_curated, Magasanikbacteria, Parcubacteria, Bacteria

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22112..22882
DNA (771bp) protein (257aa)
Beta-Ig-H3/fasciclin Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CUT4_METMJ
beta-Ig-H3/fasciclin
Tax=RIFOXYD1_FULL_OD1_Magasanikbacteria_40_23_curated
S_p1_S3_coassembly_k141_1010107_23
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(23005..23370)
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T989_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMR75359.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540-F20.;"
S_p1_S3_coassembly_k141_1010107_24
Candidatus Parvarchaeum acidiphilum, Candidatus Parvarchaeum, Parvarchaeota, Archaea

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23516..23905
DNA (390bp) protein (130aa)
Transcriptional regulator, XRE family Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EGC5_9EURY
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EEZ92590.1}; species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidiphilum ARMAN-4.;"
transcriptional regulator protein-like protein
S_p1_S3_coassembly_k141_1010107_25
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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23898..24662
DNA (765bp) protein (255aa)
Putative ATP-dependent transporter SufC Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N5W0_ANATU
sufC; putative ATP-dependent transporter SufC
Putative ATP-dependent transporter SufC {ECO:0000313|EMBL:BAJ63824.1}; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
S_p1_S3_coassembly_k141_1010107_26
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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24663..26078
DNA (1416bp) protein (472aa)
Fe-S cluster assembly protein SufB Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4B0_9ARCH
Fe-S cluster assembly protein SufB
Fe-S cluster assembly protein SufB {ECO:0000313|EMBL:BAJ47129.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.;"
S_p1_S3_coassembly_k141_1010107_27
RBG_16_Archaea_50_20_curated, Archaea

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26092..27435
DNA (1344bp) protein (448aa)
hypothetical protein Tax=Crenarchaeota archaeon SCGC AAA471-B05 RepID=UPI0003643BBC
FeS assembly protein SufD
Tax=RBG_16_Archaea_50_20_curated
S_p1_S3_coassembly_k141_1010107_28

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27440..28660
DNA (1221bp) protein (407aa)
csd; putative cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Cysteine desulfurase {ECO:0000313|EMBL:AJF61424.1}; species="Archaea.;" source="archaeon GW2011_AR15.;"
S_p1_S3_coassembly_k141_1010107_29

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28657..29037
DNA (381bp) protein (127aa)
NifU family SUF system FeS assembly protein; K04488 nitrogen fixation protein NifU and related proteins bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Nitrogen fixation protein NifU {ECO:0000313|EMBL:KHO48428.1}; species="Archaea.;" source="archaeon GW2011_AR5.;"
nitrogen fixation protein NifU
S_p1_S3_coassembly_k141_1010107_30
Thermoplasma volcanium, Thermoplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(29032..29667)
DNA (636bp) protein (212aa)
7-cyano-7-deazaguanine synthase {ECO:0000255|HAMAP-Rule:MF_01633}; EC=6.3.4.20 {ECO:0000255|HAMAP-Rule:MF_01633};; 7-cyano-7-carbaguanine synthase {ECO:0000255|HAMAP-Rule:MF_01633}; Archaeosine biosynthesis protein QueC {ECO:0000255|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000255|HAMAP-Rule:MF_01633}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma.;" source="Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC; 15438 / GSS1).;"
7-cyano-7-deazaguanine synthase Tax=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) RepID=QUEC_THEVO
ATPase
Displaying items 1-30 of 45 in total

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