ggKbase home page

S_p1_S3_coassembly_k141_1359333

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1359333_1
unknown

Not on your lists

comp(69..1151)
DNA (1083bp) protein (361aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1359333_2
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(1276..1920)
DNA (645bp) protein (215aa)
hypothetical protein Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B4465A
Tax=RBG_13_Nitrospirae_43_8_curated
S_p1_S3_coassembly_k141_1359333_3
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

comp(1960..2349)
DNA (390bp) protein (130aa)
Putative uncharacterized protein Tax=Candidatus Haloredivivus sp. G17 RepID=H0AA39_9EURY
Tax=RBG_13_Nitrospirae_43_8_curated
S_p1_S3_coassembly_k141_1359333_4
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

2390..4624
DNA (2235bp) protein (745aa)
type VI secretion protein Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B5B876
hypothetical protein
Tax=RBG_13_Nitrospirae_43_8_curated
S_p1_S3_coassembly_k141_1359333_5
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

4669..6618
DNA (1950bp) protein (650aa)
hypothetical protein bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein
Tax=RBG_13_Nitrospirae_43_8_curated
S_p1_S3_coassembly_k141_1359333_6
unknown

Not on your lists

6800..7024
DNA (225bp) protein (75aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1359333_7
unknown

Not on your lists

7021..7800
DNA (780bp) protein (260aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1359333_8
unknown

Not on your lists

7835..9718
DNA (1884bp) protein (628aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1359333_9
unknown

Not on your lists

9777..10169
DNA (393bp) protein (131aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1359333_10
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

10218..10541
DNA (324bp) protein (108aa)
Tax=RBG_13_Nitrospirae_43_8_curated
S_p1_S3_coassembly_k141_1359333_11
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

10597..10884
DNA (288bp) protein (96aa)
Tax=RBG_13_Nitrospirae_43_8_curated
S_p1_S3_coassembly_k141_1359333_12
unknown

Not on your lists

10904..11293
DNA (390bp) protein (130aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1359333_13
unknown

Not on your lists

11290..11850
DNA (561bp) protein (187aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1359333_14
unknown

Not on your lists

11856..12290
DNA (435bp) protein (145aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1359333_15
unknown

Not on your lists

12287..13420
DNA (1134bp) protein (378aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1359333_16
unknown

Not on your lists

comp(13446..15209)
DNA (1764bp) protein (588aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1359333_17
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

15332..15619
DNA (288bp) protein (96aa)
DNA/RNA-binding protein Alba 1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=ALBA1_METKA
DNA/RNA-binding protein Alba
Tax=RBG_13_Nitrospirae_43_8_curated
S_p1_S3_coassembly_k141_1359333_18
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

Not on your lists

comp(15629..17173)
DNA (1545bp) protein (515aa)
Putative thymidine phosphorylase {ECO:0000313|EMBL:CDI06349.1}; EC=2.4.2.4 {ECO:0000313|EMBL:CDI06349.1};; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
Putative thymidine phosphorylase Tax=Thaumarchaeota archaeon N4 RepID=V6AUY2_9ARCH
Putative thymidine phosphorylase
S_p1_S3_coassembly_k141_1359333_19
unknown

Not on your lists

comp(17170..17565)
DNA (396bp) protein (132aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1359333_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17570..18856)
DNA (1287bp) protein (429aa)
Ribulose bisphosphate carboxylase {ECO:0000256|HAMAP-Rule:MF_01133}; Short=RuBisCO {ECO:0000256|HAMAP-Rule:MF_01133};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01133};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
rbcL; ribulose bisophosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
ribulose bisphosphate carboxylase, type III
S_p1_S3_coassembly_k141_1359333_21
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(18853..19668)
DNA (816bp) protein (272aa)
Putative translation initiation factor eIF-2B subunit 2 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
ribose 1,5-bisphosphate isomerase
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_1359333_22
Clostridium ljungdahlii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19699..20331
DNA (633bp) protein (211aa)
Phosphoribosyltransferase Tax=Clostridium RepID=U5RQF2_9CLOT
phosphoribosyltransferase
Putative phosphoribosyltransferase {ECO:0000313|EMBL:ADK15698.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC).;"
S_p1_S3_coassembly_k141_1359333_trna_3
unknown

Not on your lists

comp(20333..20452)
DNA (120bp)
transferRNA Undet
S_p1_S3_coassembly_k141_1359333_23
unknown

Not on your lists

comp(20478..20846)
DNA (369bp) protein (123aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1359333_trna_2
unknown

Not on your lists

comp(20850..20937)
DNA (88bp)
transferRNA Thr
S_p1_S3_coassembly_k141_1359333_24
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

20978..21253
DNA (276bp) protein (92aa)
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DG37_9EURY
PpiC-type peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:EET90507.1}; species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
PpiC-type peptidyl-prolyl cis-trans isomerase
S_p1_S3_coassembly_k141_1359333_25
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(21255..22340)
DNA (1086bp) protein (362aa)
Type 2 DNA topoisomerase 6 subunit A Tax=Candidatus Parvarchaeum acidophilus RepID=D6GWL5_9EURY
DNA topoisomerase ATP-hydrolyzing
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_1359333_26
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists

comp(22318..23886)
DNA (1569bp) protein (523aa)
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA topoisomerase VI, subunit B
Tax=RBG_16_Micrarchaeota_36_9_curated
S_p1_S3_coassembly_k141_1359333_27
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists


comp(23935..24414)
DNA (480bp) protein (160aa)
KH domain protein Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8ANX4_METOI
KH domain protein
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_1359333_28
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(24420..24743)
DNA (324bp) protein (108aa)
Translation initiation factor 1A Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXR6_METFV
translation initiation factor 1a (aeif-1a)
Tax=AR6
Displaying items 1-30 of 39 in total

View Taxonomy