ggKbase home page

S_p1_S3_coassembly_k141_20352

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_20352_1

Not on your lists

536..2047
DNA (1512bp) protein (504aa)
Cytoplasmic axial filament protein {ECO:0000313|EMBL:AAR37494.1}; EC=3.1.4.- {ECO:0000313|EMBL:AAR37494.1};; species="Bacteria; environmental samples.;" source="uncultured marine bacterium 106.;"
Cytoplasmic axial filament protein Tax=uncultured marine bacterium 106 RepID=Q6SHX8_9BACT
cafA; ribonuclease G
S_p1_S3_coassembly_k141_20352_2
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2301..3311
DNA (1011bp) protein (337aa)
RluA family pseudouridine synthase (EC:3.2.1.17)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
Pseudouridine synthase Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EIC0_METSB
S_p1_S3_coassembly_k141_20352_3
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3352..3558
DNA (207bp) protein (69aa)
Putative uncharacterized protein bin=GWC2_Syntrophobacterales_56_13 species=Oscillatoria acuminata genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_58_17_curated
S_p1_S3_coassembly_k141_20352_4
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3720..4064
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SM55_9DELT
Tax=RBG_13_Deltaproteobacteria_43_22_curated
S_p1_S3_coassembly_k141_20352_5
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

4042..4272
DNA (231bp) protein (77aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI0003473AAE
hypothetical protein
Tax=GWA2_RIF03_38_11_curated
S_p1_S3_coassembly_k141_20352_6
unknown

Not on your lists

4744..6351
DNA (1608bp) protein (536aa)

This feature has no annotations

S_p1_S3_coassembly_k141_20352_7
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6378..7454
DNA (1077bp) protein (359aa)
Uncharacterized protein Tax=Plesiocystis pacifica SIR-1 RepID=A6FXB2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM81936.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
S_p1_S3_coassembly_k141_20352_8
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

7595..8065
DNA (471bp) protein (157aa)
hypothetical protein Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026276BE
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
S_p1_S3_coassembly_k141_20352_9
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8220..9269
DNA (1050bp) protein (350aa)
Peptide ABC transporter, permease protein Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=Q6MQU8_BDEBA
peptide ABC transporter, permease protein
Peptide ABC transporter, permease protein {ECO:0000313|EMBL:AHI04764.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio bacteriovorus W.;"
S_p1_S3_coassembly_k141_20352_10
unknown

Not on your lists

comp(9283..9606)
DNA (324bp) protein (108aa)

This feature has no annotations

S_p1_S3_coassembly_k141_20352_11
RifOxyA12_full_OD1_Moranbacteria_35_19_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(9590..10507)
DNA (918bp) protein (306aa)
Tax=RifOxyA12_full_OD1_Moranbacteria_35_19_curated
S_p1_S3_coassembly_k141_20352_12
RBG_16_Bdellovibrionales_40_8_curated, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

10584..11594
DNA (1011bp) protein (337aa)
Putative ABC transport system, membrane protein bin=GWA2__Bacteriovorax-rel_49_15 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
peptide ABC transporter permease
Tax=RBG_16_Bdellovibrionales_40_8_curated
S_p1_S3_coassembly_k141_20352_13
unknown

Not on your lists

11908..12399
DNA (492bp) protein (164aa)

This feature has no annotations

S_p1_S3_coassembly_k141_20352_14
R_Deltaproteobacteria_38_15, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12451..13968
DNA (1518bp) protein (506aa)
family 5 extracellular solute-binding protein Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002628378
family 5 extracellular solute-binding protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_38_15_curated
S_p1_S3_coassembly_k141_20352_15
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13985..14902
DNA (918bp) protein (306aa)
glutathione ABC transporter permease Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002628E78
ABC transporter permease
Tax=RBG_16_Deltaproteobacteria_54_18_curated
S_p1_S3_coassembly_k141_20352_16

Not on your lists

14899..15726
DNA (828bp) protein (276aa)
nickel ABC transporter permease Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002628E79
Putative dipeptide ABC transporter {ECO:0000313|EMBL:ABD75794.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
gsiD; binding-protein-dependent transport system inner membrane protein
S_p1_S3_coassembly_k141_20352_17
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

15844..16890
DNA (1047bp) protein (349aa)
Cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:AFZ33656.1}; EC=2.1.1.79 {ECO:0000313|EMBL:AFZ33656.1};; species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;"
Cyclopropane-fatty-acyl-phospholipid synthase Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XNP1_STAC7
S_p1_S3_coassembly_k141_20352_18
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

16979..17893
DNA (915bp) protein (305aa)
Phospholipid/glycerol acyltransferase Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GDB9_SPITZ
phospholipid/glycerol acyltransferase
Tax=RBG_16_Nitrospirae_64_22_curated
S_p1_S3_coassembly_k141_20352_19
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18035..18835
DNA (801bp) protein (267aa)
Enoyl-CoA hydratase bin=GWF2_Methylomirabilis_70_14 species=Tistrella mobilis genus=Tistrella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
enoyl-CoA hydratase
Tax=RBG_16_Gamma2_60_9_curated
S_p1_S3_coassembly_k141_20352_20
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18993..19826
DNA (834bp) protein (278aa)
SAM-dependent methyltransferase Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SG26_HAHCH
SAM-dependent methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
S_p1_S3_coassembly_k141_20352_21
unknown

Not on your lists

comp(19878..20006)
DNA (129bp) protein (43aa)

This feature has no annotations

S_p1_S3_coassembly_k141_20352_22
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

20321..20995
DNA (675bp) protein (225aa)
Channel protein, hemolysin III family Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZUT6_OPITP
hemolysin III family channel protein
Channel protein, hemolysin III family {ECO:0000313|EMBL:ACB74970.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
S_p1_S3_coassembly_k141_20352_23
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

21033..21521
DNA (489bp) protein (163aa)
hypothetical protein; K09129 hypothetical protein bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=CSP1_3_Armatimonadetes
S_p1_S3_coassembly_k141_20352_24
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21591..22583)
DNA (993bp) protein (331aa)
Uncharacterized low-complexity protein Tax=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) RepID=A1S9M5_SHEAM
hypothetical protein
Kef-type K+ transport system, NAD-binding component {ECO:0000313|EMBL:KJE46647.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas viridans.;"
S_p1_S3_coassembly_k141_20352_25
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23030..24010
DNA (981bp) protein (327aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103)
L-threonine 3-dehydrogenase Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CPQ8_PSEUX
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
S_p1_S3_coassembly_k141_20352_26
unknown

Not on your lists

24098..24250
DNA (153bp) protein (51aa)

This feature has no annotations

S_p1_S3_coassembly_k141_20352_27
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24320..25465
DNA (1146bp) protein (382aa)
hypothetical protein Tax=Pseudomonas pyrrocinia RepID=UPI00031AB7CB
Uncharacterized protein {ECO:0000313|EMBL:ETX00623.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
putative hydrolase
S_p1_S3_coassembly_k141_20352_28
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25732..26835
DNA (1104bp) protein (368aa)
hypothetical protein Tax=Sphingomonas wittichii RepID=UPI00030F5767
luciferase family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
S_p1_S3_coassembly_k141_20352_29
unknown

Not on your lists

comp(27027..27155)
DNA (129bp) protein (43aa)

This feature has no annotations

S_p1_S3_coassembly_k141_20352_30
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27423..28124
DNA (702bp) protein (234aa)
Tax=RBG_16_Gamma2_60_9_curated
Displaying 30 items

View Taxonomy