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S_p1_S3_coassembly_k141_814558

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_814558_1
unknown

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3..413
DNA (411bp) protein (137aa)

This feature has no annotations

S_p1_S3_coassembly_k141_814558_2
unknown

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545..2908
DNA (2364bp) protein (788aa)

This feature has no annotations

S_p1_S3_coassembly_k141_814558_3
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

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comp(2935..3768)
DNA (834bp) protein (278aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625F85
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_814558_4
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4008..4505
DNA (498bp) protein (166aa)
Transcriptional regulator, CarD family Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CCQ2_9CLOT
Transcriptional regulator, CarD family {ECO:0000313|EMBL:EOD00065.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
CarD family transcriptional regulator
S_p1_S3_coassembly_k141_814558_5
Coraliomargarita sp. CAG:312, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(4720..5697)
DNA (978bp) protein (326aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|RuleBase:RU000422};; species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita; environmental samples.;" source="Coraliomargarita sp. CAG:312.;"
Malate dehydrogenase Tax=Coraliomargarita sp. CAG:312 RepID=R7L2W8_9BACT
malate dehydrogenase
S_p1_S3_coassembly_k141_814558_6
unknown

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comp(5860..6435)
DNA (576bp) protein (192aa)

This feature has no annotations

S_p1_S3_coassembly_k141_814558_7
RLO_PLX_64_10, Bacteria

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comp(6462..7343)
DNA (882bp) protein (294aa)
Putative heme exporter protein CcmB Tax=Nitrospina gracilis 3/211 RepID=M1YFY7_9BACT
heme exporter protein CcmB
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
S_p1_S3_coassembly_k141_814558_8
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(7340..8464)
DNA (1125bp) protein (375aa)
hypothetical protein Tax=Amorphus coralli RepID=UPI000377883D
histone deacetylase superfamily protein
Histone deacetylase superfamily {ECO:0000313|EMBL:ABU57178.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
S_p1_S3_coassembly_k141_814558_9
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8461..9159)
DNA (699bp) protein (233aa)
hypothetical protein Tax=Novispirillum itersonii RepID=UPI000379FB8D
Uncharacterized protein {ECO:0000313|EMBL:BAN69791.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
hypothetical protein
S_p1_S3_coassembly_k141_814558_10
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9169..10593)
DNA (1425bp) protein (475aa)
Iron-sulfur cluster binding protein Tax=Desulfovibrio vulgaris RepID=A1VD78_DESVV
(Fe-S)-binding protein {ECO:0000313|EMBL:EWY36632.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
iron-sulfur cluster binding protein
S_p1_S3_coassembly_k141_814558_11
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10590..11360)
DNA (771bp) protein (257aa)
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI0003782A7B
putative Fe-S oxidoreductase
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:CCD02028.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
S_p1_S3_coassembly_k141_814558_12
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11407..12432)
DNA (1026bp) protein (342aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase Tax=gamma proteobacterium IMCC2047 RepID=F3KD55_9GAMM
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000313|EMBL:EGG99698.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium IMCC2047.;"
phosphoribosylaminoimidazolesuccinocarboxamide synthase
S_p1_S3_coassembly_k141_814558_trna_1
unknown

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comp(12623..12696)
DNA (74bp)
transferRNA Arg
S_p1_S3_coassembly_k141_814558_13

Not on your lists

12983..13186
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK85920.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p1_S3_coassembly_k141_814558_14
unknown

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13183..13521
DNA (339bp) protein (113aa)

This feature has no annotations

S_p1_S3_coassembly_k141_814558_15
unknown

Not on your lists

13508..14098
DNA (591bp) protein (197aa)

This feature has no annotations

S_p1_S3_coassembly_k141_814558_16
uncultured delta proteobacterium HF4000_08N17, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14111..16192)
DNA (2082bp) protein (694aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Proteobacteria; Deltaproteobacteria; environmental samples.;" source="uncultured delta proteobacterium HF4000_08N17.;"
UvrD/REP helicase Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026263AD
ATP-dependent DNA helicase Rep
S_p1_S3_coassembly_k141_814558_17
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16273..16629)
DNA (357bp) protein (119aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M300_CLOCD
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
Displaying 18 items

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