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S_p1_S3_coassembly_k141_1334723

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1334723_1
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..527)
DNA (525bp) protein (175aa)
peptide ABC transporter substrate-binding protein Tax=Mesorhizobium sp. WSM4349 RepID=UPI000375ECAD
Putative ABC transporter peptide-binding protein {ECO:0000313|EMBL:KGJ65415.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
ABC transporter peptide-binding protein
S_p1_S3_coassembly_k141_1334723_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(901..2493)
DNA (1593bp) protein (531aa)
ABC transporter peptide-binding protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter substrate-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
S_p1_S3_coassembly_k141_1334723_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2736..4325)
DNA (1590bp) protein (530aa)
ABC transporter peptide-binding protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter substrate-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
S_p1_S3_coassembly_k141_1334723_4
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4396..5991)
DNA (1596bp) protein (532aa)
peptide ABC transporter substrate-binding protein Tax=Bradyrhizobium japonicum RepID=UPI00036B634D
peptide ABC transporter substrate-binding protein
Putative ABC transporter peptide-binding protein {ECO:0000313|EMBL:KGJ65415.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
S_p1_S3_coassembly_k141_1334723_5
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6561..7481
DNA (921bp) protein (307aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
Aspartate carbamoyltransferase Tax=Desulfococcus multivorans DSM 2059 RepID=S7UY81_DESML
aspartate carbamoyltransferase
S_p1_S3_coassembly_k141_1334723_6
unknown

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7495..7872
DNA (378bp) protein (126aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1334723_7
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

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7948..8820
DNA (873bp) protein (291aa)
hypothetical protein Tax=Oscillatoria formosa RepID=UPI00037EA923
pentapeptide repeat-containing protein
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
S_p1_S3_coassembly_k141_1334723_8
unknown

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comp(9074..9424)
DNA (351bp) protein (117aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1334723_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(10004..10924)
DNA (921bp) protein (307aa)
Putative peptide ABC transporter permease protein bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease
Tax=GWA2_Rokubacteria_73_35_curated
S_p1_S3_coassembly_k141_1334723_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(10976..11938)
DNA (963bp) protein (321aa)
Dipeptide transport system permease protein DppB bin=GWA2_Methylomirabilis_73_35 species=Oligotropha carboxidovorans genus=Oligotropha taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gsiC; glutathione transport system permease GsiC
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
S_p1_S3_coassembly_k141_1334723_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12003..13613)
DNA (1611bp) protein (537aa)
Putative periplasmic dipeptide transport substrate-binding protein bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative periplasmic dipeptide transport substrate-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
S_p1_S3_coassembly_k141_1334723_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13985..15589)
DNA (1605bp) protein (535aa)
Putative periplasmic dipeptide transport substrate-binding protein bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative periplasmic dipeptide transport substrate-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
S_p1_S3_coassembly_k141_1334723_13
Brevibacillus laterosporus, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15674..16057)
DNA (384bp) protein (128aa)
Putative uncharacterized protein Tax=Brevibacillus laterosporus LMG 15441 RepID=F7TYR5_BRELA
lactoylglutathione lyase
Lactoylglutathione lyase {ECO:0000313|EMBL:AIG26539.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus laterosporus LMG 15441.;"
S_p1_S3_coassembly_k141_1334723_14
unknown

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16070..16366
DNA (297bp) protein (99aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1334723_15
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(16219..17817)
DNA (1599bp) protein (533aa)
Putative periplasmic dipeptide transport substrate-binding protein bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative periplasmic dipeptide transport substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
S_p1_S3_coassembly_k141_1334723_16
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18417..19970
DNA (1554bp) protein (518aa)
pccB; propionyl-CoA carboxylase beta subunit (EC:6.4.1.3)
Carboxyl transferase Tax=Acidovorax delafieldii 2AN RepID=C5T3M3_ACIDE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
S_p1_S3_coassembly_k141_1334723_17
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20084..20560
DNA (477bp) protein (159aa)
hypothetical protein Tax=unclassified candidate division KSB1 RepID=UPI000371B60F
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
S_p1_S3_coassembly_k141_1334723_18
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20655..22013
DNA (1359bp) protein (453aa)
Tryptophan synthase beta chain Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NL70_ROSCS
tryptophan synthase subunit beta
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
S_p1_S3_coassembly_k141_1334723_19
Dermacoccus sp. Ellin185, Dermacoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22307..22951
DNA (645bp) protein (215aa)
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EFP59517.1}; EC=2.1.1.- {ECO:0000313|EMBL:EFP59517.1};; species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Dermacoccus.;" source="Dermacoccus sp. Ellin185.;"
methyltransferase Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037FA905
methyltransferase
S_p1_S3_coassembly_k141_1334723_20
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

22948..23691
DNA (744bp) protein (248aa)
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_1334723_21
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

23744..24613
DNA (870bp) protein (290aa)
Tetratricopeptide TPR_2 repeat protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021S7_SOLUE
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABJ84298.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
S_p1_S3_coassembly_k141_1334723_22
Winogradskyella psychrotolerans, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24912..25835
DNA (924bp) protein (308aa)
RDD domain-containing protein Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625F45
Uncharacterized protein {ECO:0000313|EMBL:EPR69780.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella psychrotolerans RS-3.;"
S_p1_S3_coassembly_k141_1334723_23
unknown

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comp(25780..26001)
DNA (222bp) protein (74aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1334723_24
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

26655..27482
DNA (828bp) protein (276aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI000360966F
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_1334723_25
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

27620..28930
DNA (1311bp) protein (437aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI00037A3BBA
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_1334723_26
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

28955..30034
DNA (1080bp) protein (360aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI0003780343
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
Displaying 26 items

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