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S_p1_S3_coassembly_k141_1867813

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1867813_1
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1352
DNA (1350bp) protein (450aa)
enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
enolase Tax=Desulfurispora thermophila RepID=UPI0003719EB4
S_p1_S3_coassembly_k141_1867813_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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1387..1794
DNA (408bp) protein (136aa)
septum formation initiator Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI0002889D37
cell division protein FtsB
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
S_p1_S3_coassembly_k141_1867813_3
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1791..2255
DNA (465bp) protein (155aa)
Uncharacterized protein Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5ECX9_GEOBB
hypothetical protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
S_p1_S3_coassembly_k141_1867813_4
unknown

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2322..2678
DNA (357bp) protein (119aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1867813_5
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2695..3789)
DNA (1095bp) protein (365aa)
Putative racemase Tax=alpha proteobacterium BAL199 RepID=A8TQ08_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KJC45149.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
muconate lactonizing mandelate racemase protein
S_p1_S3_coassembly_k141_1867813_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3929..5071)
DNA (1143bp) protein (381aa)
Putative racemase Tax=alpha proteobacterium BAL199 RepID=A8TQ08_9PROT
muconate lactonizing mandelate racemase protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
S_p1_S3_coassembly_k141_1867813_7
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5185..5541)
DNA (357bp) protein (119aa)
Uncharacterized protein Tax=Oscillatoria sp. PCC 6506 RepID=D8FTJ9_9CYAN
hypothetical protein
Tax=CG_Desulfarul_01
S_p1_S3_coassembly_k141_1867813_8
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(5528..5845)
DNA (318bp) protein (106aa)
Putative uncharacterized protein bin=GWB2_Proteobacteria_55_19 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
DNA polymerase beta domain-containing protein
Tax=RBG_16_Chloroflexi_63_12_curated
S_p1_S3_coassembly_k141_1867813_9
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5883..6710)
DNA (828bp) protein (276aa)
Short chain enoyl-CoA hydratase {ECO:0000313|EMBL:ABC22956.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ABC22956.1};; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
enoyl-CoA hydratase Tax=Schlesneria paludicola RepID=UPI00029AB07B
enoyl-CoA hydratase
S_p1_S3_coassembly_k141_1867813_10
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

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7218..8033
DNA (816bp) protein (272aa)
MotA/TolQ/ExbB proton channel Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026257D8
MotA/TolQ/ExbB proton channel
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_1867813_11
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

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8033..8671
DNA (639bp) protein (213aa)
OmpA/MotB domain-containing protein Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026257DA
motB; flagellar motor protein MotB
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
S_p1_S3_coassembly_k141_1867813_12
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8702..9373)
DNA (672bp) protein (224aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Ribosomal RNA small subunit methyltransferase G Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WT14_9BURK
methyltransferase GidB
S_p1_S3_coassembly_k141_1867813_13
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

9698..11293
DNA (1596bp) protein (532aa)
Uncharacterized protein Tax=Leishmania major RepID=E9AEK6_LEIMA
CheC, inhibitor of MCP methylation / FliN fusion protein
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_1867813_14
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11338..12285
DNA (948bp) protein (316aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI000313BEBE
Tax=GWC2_Deltaproteobacteria_55_46b_curated
S_p1_S3_coassembly_k141_1867813_15
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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12831..14822
DNA (1992bp) protein (664aa)
NADH:flavin oxidoreductases Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D4R8_PELTS
NemA; NADH:flavin oxidoreductases
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:CDH45648.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
S_p1_S3_coassembly_k141_1867813_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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14847..15941
DNA (1095bp) protein (365aa)
fixB; protein FixB; electron transfer flavoprotein alpha chain bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
etfA3; Electron transfer flavoprotein subunit alpha
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
S_p1_S3_coassembly_k141_1867813_17
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15925..17229
DNA (1305bp) protein (435aa)
Dehydrogenases Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D4S0_PELTS
FixC; dehydrogenases
Dehydrogenases {ECO:0000313|EMBL:BAF58779.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI).;"
S_p1_S3_coassembly_k141_1867813_18
unknown

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17518..18375
DNA (858bp) protein (286aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1867813_19
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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18489..20549
DNA (2061bp) protein (687aa)
hypothetical protein Tax=Prochlorothrix hollandica RepID=UPI0003455961
DNA methylase
Tax=RBG_13_Nitrospirae_43_8_curated
S_p1_S3_coassembly_k141_1867813_20
unknown

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20546..23977
DNA (3432bp) protein (1144aa)
Type III restriction enzyme, res subunit Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQD6_9RHIZ
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:CPR18360.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
type III restriction enzyme, res subunit
S_p1_S3_coassembly_k141_1867813_21
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24143..24625
DNA (483bp) protein (161aa)
response regulator receiver modulated CheB methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Chemotaxis response regulator protein-glutamate methylesterase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5T6_GEOUR
S_p1_S3_coassembly_k141_1867813_22
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24847..26418
DNA (1572bp) protein (524aa)
hypothetical protein, partial Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0003622047
peptidase S1 and S6 chymotrypsin/Hap
Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
S_p1_S3_coassembly_k141_1867813_23
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

26415..27893
DNA (1479bp) protein (493aa)
PDZ domain protein Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0F6C0_9LEPT
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
S_p1_S3_coassembly_k141_1867813_24
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(27961..28644)
DNA (684bp) protein (228aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XH2_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85643.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
S_p1_S3_coassembly_k141_1867813_25
Alcanivorax hongdengensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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28844..29488
DNA (645bp) protein (215aa)
RNA polymerase sigma factor Tax=Alcanivorax hongdengensis A-11-3 RepID=L0WAC8_9GAMM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax hongdengensis A-11-3.;"
algU; RNA polymerase sigma factor
S_p1_S3_coassembly_k141_1867813_26
unknown

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29478..30209
DNA (732bp) protein (244aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1867813_27
unknown

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comp(30324..30911)
DNA (588bp) protein (196aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1867813_28
Thermofilum sp. 1910b, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(30921..33134)
DNA (2214bp) protein (738aa)
ATPase AAA Tax=Thermofilum sp. 1910b RepID=S5Z7G5_9CREN
ATPase AAA
ATPase AAA {ECO:0000313|EMBL:AGT35295.1}; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp. 1910b.;"
S_p1_S3_coassembly_k141_1867813_29
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(33333..34148)
DNA (816bp) protein (272aa)
Putative racemase bin=GWF2_Methylomirabilis_70_14 species=Bordetella avium genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
racemase
Tax=GWA2_Rokubacteria_70_23_curated
S_p1_S3_coassembly_k141_1867813_30
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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34602..36140
DNA (1539bp) protein (513aa)
Putative dehydrogenase bin=GWC2_Methylomirabilis_70_24 species=Bordetella avium genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
dehydrogenase
Tax=GWA2_Rokubacteria_70_23_curated
Displaying items 1-30 of 33 in total

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