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S_p2_S4_coassembly_k141_2617708

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_2617708_1
GWF2_Planctomycetes_40_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(3..893)
DNA (891bp) protein (297aa)
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing bin=GWC2_Deltaproteobacteria_55_46 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
UDP-N-acetylglucosamine-2-epimerase
Tax=GWF2_Planctomycetes_40_8_curated
S_p2_S4_coassembly_k141_2617708_2
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(896..1300)
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) RepID=Q39W21_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB31553.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
S_p2_S4_coassembly_k141_2617708_3
GWF2_Planctomycetes_40_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(1300..1695)
DNA (396bp) protein (132aa)
Nucleotidyltransferase-related protein bin=GWC2_Nitrospirae_57_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
nucleotidyltransferase-related protein
Tax=GWF2_Planctomycetes_40_8_curated
S_p2_S4_coassembly_k141_2617708_4
GWF2_Planctomycetes_40_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(1743..2777)
DNA (1035bp) protein (345aa)
N-acetylneuraminate synthase (EC:2.5.1.57)
N-acetylneuraminate synthase Tax=Caminibacter mediatlanticus TB-2 RepID=A6DDY9_9PROT
Tax=GWF2_Planctomycetes_40_8_curated
S_p2_S4_coassembly_k141_2617708_5
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(2774..3406)
DNA (633bp) protein (211aa)
Hexapeptide transferase family protein Tax=Planctomyces maris DSM 8797 RepID=A6C2H8_9PLAN
sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
S_p2_S4_coassembly_k141_2617708_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(3406..4572)
DNA (1167bp) protein (389aa)
DegT/DnrJ/EryC1/StrS family protein bin=GWC2_NOV_55_46 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_NOV_55_46 organism_group=Proteobacteria
aminotransferase, AHBA_syn family
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
S_p2_S4_coassembly_k141_2617708_7

Not on your lists

comp(4563..5552)
DNA (990bp) protein (330aa)
NDP-sugar dehydratase or epimerase {ECO:0000313|EMBL:CEG13868.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
Epimerase family protein bin=GWC2_Methylomirabilis_70_24 species=Saccharothrix espanaensis genus=Saccharothrix taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Epimerase family protein
S_p2_S4_coassembly_k141_2617708_8

Not on your lists

comp(5537..6982)
DNA (1446bp) protein (482aa)
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:CEG13844.1}; EC=1.1.1.22 {ECO:0000313|EMBL:CEG13844.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
hypothetical protein Tax=Cloacimonetes bacterium JGI 0000039-G13 RepID=UPI000379C378
NDP-sugar dehydrogenase
S_p2_S4_coassembly_k141_2617708_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(7127..7783)
DNA (657bp) protein (219aa)
NAD-dependent epimerase/dehydratase Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QRV0_PERMH
NAD-dependent epimerase/dehydratase
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
S_p2_S4_coassembly_k141_2617708_10
RHI_Planctomycetes_42_15, Planctomycetes, Bacteria

Not on your lists

comp(7869..8438)
DNA (570bp) protein (190aa)
Putative uncharacterized protein bin=GWC2_Planctomycete_KSU_39_26 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
MarR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_Planctomycetes_42_15_curated
S_p2_S4_coassembly_k141_2617708_11
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

comp(8816..9322)
DNA (507bp) protein (169aa)
Similar to transcription antitermination protein NusG bin=GWC2_Planctomycete_KSU_39_26 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
transcription antitermination protein nusG
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
S_p2_S4_coassembly_k141_2617708_12
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

comp(9525..10421)
DNA (897bp) protein (299aa)
Putative uncharacterized protein bin=GWC2_Planctomycete_KSU_39_26 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
putative oxidoreductase/HEAT repeat-containing protein
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
S_p2_S4_coassembly_k141_2617708_13
RIFOXYD12_FULL_Planctomycetes_42_12_curated, Planctomycetes, Bacteria

Not on your lists

comp(10613..11260)
DNA (648bp) protein (216aa)
Putative uncharacterized protein bin=GWF2_Nitrospirae_44_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=RIFOXYD12_FULL_Planctomycetes_42_12_curated
S_p2_S4_coassembly_k141_2617708_14
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

comp(11250..11504)
DNA (255bp) protein (85aa)
Putative uncharacterized protein bin=GWF2_Nitrospirae_44_13 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
S_p2_S4_coassembly_k141_2617708_15
RLO_Planctomycetes_39_13, Planctomycetes, Bacteria

Not on your lists

comp(11609..11764)
DNA (156bp) protein (52aa)
Tax=RIFCSPLOWO2_12_FULL_Planctomycetes_39_13_curated
S_p2_S4_coassembly_k141_2617708_16
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

comp(11736..13247)
DNA (1512bp) protein (504aa)
Phosphomannomutase bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
glmM; phosphomannomutase
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
S_p2_S4_coassembly_k141_2617708_17
GWB2_Planctomycetes_41_19_curated, Brocadiales, Planctomycetes, Bacteria

Not on your lists

comp(13274..13888)
DNA (615bp) protein (205aa)
NADPH-dependent FMN reductase bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
multimeric flavodoxin WrbA
Tax=GWB2_Planctomycetes_41_19_curated
S_p2_S4_coassembly_k141_2617708_18
RifOxyB12_full_Planctomycetes_42_10_curated, Planctomycetes, Bacteria

Not on your lists

comp(13967..14923)
DNA (957bp) protein (319aa)
NAD-dependent epimerase/dehydratase Tax=planctomycete KSU-1 RepID=I3IHQ1_9PLAN
dTDP-glucose 4,6-dehydratase
Tax=RifOxyB12_full_Planctomycetes_42_10_curated
S_p2_S4_coassembly_k141_2617708_19
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

15075..16691
DNA (1617bp) protein (539aa)
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase Tax=planctomycete KSU-1 RepID=I3IHQ2_9PLAN
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
S_p2_S4_coassembly_k141_2617708_20
RifOxyB12_full_Planctomycetes_42_10_curated, Planctomycetes, Bacteria

Not on your lists

16865..17278
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IHQ3_9PLAN
hypothetical protein
Tax=RifOxyB12_full_Planctomycetes_42_10_curated
S_p2_S4_coassembly_k141_2617708_21
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

17381..19456
DNA (2076bp) protein (692aa)
glutamate synthase (EC:1.4.1.13)
4Fe-4S ferredoxin iron-sulfur binding subunit Tax=planctomycete KSU-1 RepID=I3IHQ4_9PLAN
4Fe-4S ferredoxin iron-sulfur binding subunit {ECO:0000313|EMBL:GAB61249.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
S_p2_S4_coassembly_k141_2617708_22
R_Planctomycetes_38_41, Planctomycetes, Bacteria

Not on your lists

19453..20127
DNA (675bp) protein (225aa)
Uncharacterized protein bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Planctomycetes_38_41_curated
S_p2_S4_coassembly_k141_2617708_23
RLO_Planctomycetes_39_13, Planctomycetes, Bacteria

Not on your lists

20241..21179
DNA (939bp) protein (313aa)
Methylenetetrahydrofolate reductase Tax=planctomycete KSU-1 RepID=I3IHQ6_9PLAN
CO dehydrogenase/acetyl-CoA synthase subunit delta, TIM barrel
Tax=RIFCSPLOWO2_12_FULL_Planctomycetes_39_13_curated
Displaying 23 items

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