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S_p2_S4_coassembly_k141_2676400

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_2676400_1
unknown

Not on your lists

comp(227..847)
DNA (621bp) protein (207aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2676400_2
GWC1_CPR2_41_48, CPR2, Bacteria

Not on your lists

comp(948..1724)
DNA (777bp) protein (259aa)
id=2357315 bin=GWD1_TM7_39_7 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
Uncharacterized protein {ECO:0000313|EMBL:KKS09293.1}; species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC1_41_48.;"
S_p2_S4_coassembly_k141_2676400_3
unknown

Not on your lists

comp(1964..2605)
DNA (642bp) protein (214aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2676400_4
unknown

Not on your lists

comp(2609..2896)
DNA (288bp) protein (96aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2676400_5
unknown

Not on your lists

comp(2977..3732)
DNA (756bp) protein (252aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2676400_6
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

4104..4988
DNA (885bp) protein (295aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037FFBA5
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
S_p2_S4_coassembly_k141_2676400_7
R_OP11_Levybacteria_40_16, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(5410..5985)
DNA (576bp) protein (192aa)
idi; isopentenyl-diphosphate delta-isomerase Idi (EC:5.3.3.2)
Isopentenyl-diphosphate Delta-isomerase Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NFP1_DESTT
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_16_curated
S_p2_S4_coassembly_k141_2676400_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(6102..7139)
DNA (1038bp) protein (346aa)
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2)
lytB; drug tolerance protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Lautropia mirabilis genus=Lautropia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
S_p2_S4_coassembly_k141_2676400_9
RIFOXYB1_FULL_RIF_OD1_06_38_37_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(7305..8390)
DNA (1086bp) protein (362aa)
Geranylgeranyl diphosphate synthase Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2MXV4_9ACTO
geranylgeranyl diphosphate synthase
Tax=RIFOXYB1_FULL_RIF_OD1_06_38_37_curated
S_p2_S4_coassembly_k141_2676400_10
R_RIF_OD1_03_48_11, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

comp(8394..9908)
DNA (1515bp) protein (505aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
aspartyl/glutamyl-tRNA amidotransferase subunit B
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_03_48_11_curated
S_p2_S4_coassembly_k141_2676400_11
unknown

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comp(10307..10969)
DNA (663bp) protein (221aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2676400_12
Parcubacteria bacterium GW2011_GWE1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(11259..11786)
DNA (528bp) protein (176aa)
Thymidylate synthase {ECO:0000313|EMBL:KKT22986.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE1_43_8.;"
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
dihydrofolate reductase
S_p2_S4_coassembly_k141_2676400_13
Parcubacteria bacterium GW2011_GWE1_43_8, Parcubacteria, Bacteria

Not on your lists

comp(11907..12830)
DNA (924bp) protein (308aa)
Thymidylate synthase {ECO:0000313|EMBL:KKT22987.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE1_43_8.;"
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
thymidylate synthase
S_p2_S4_coassembly_k141_2676400_14
R_OD1_Magasanikbacteria_47_14, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12843..13517)
DNA (675bp) protein (225aa)
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
Thymidylate kinase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_47_14_curated
S_p2_S4_coassembly_k141_2676400_15
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(13518..14084)
DNA (567bp) protein (189aa)
Tax=RBG_13_RIF_OD1_07_42_11_curated
S_p2_S4_coassembly_k141_2676400_16
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(14084..14656)
DNA (573bp) protein (191aa)
Deoxycytidine triphosphate deaminase bin=GWC2_Chloroflexi_73_18 species=Actinomyces urogenitalis genus=Actinomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
deoxycytidine triphosphate deaminase
Tax=CG_CPR12_01
S_p2_S4_coassembly_k141_2676400_17
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists


comp(14758..15444)
DNA (687bp) protein (229aa)
50S ribosomal protein L1 {ECO:0000313|EMBL:KKW15660.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
50S ribosomal protein L1 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
50S ribosomal protein L1
S_p2_S4_coassembly_k141_2676400_18
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

comp(15512..16510)
DNA (999bp) protein (333aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW01901.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
S_p2_S4_coassembly_k141_2676400_19
R_OD1_Uhrbacteria_49_11, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists


comp(16555..16980)
DNA (426bp) protein (142aa)
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
rplK; 50S ribosomal protein L11
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_49_11_curated
S_p2_S4_coassembly_k141_2676400_20
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

comp(17079..17624)
DNA (546bp) protein (182aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000377C70D
Transcription antitermination protein nusG {ECO:0000313|EMBL:KKW15657.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
nusG; transcription antitermination factor
S_p2_S4_coassembly_k141_2676400_21
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

comp(18076..19173)
DNA (1098bp) protein (366aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035EF1AA
ABC-2 type transporter {ECO:0000313|EMBL:KKW00954.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
ABC transporter
S_p2_S4_coassembly_k141_2676400_22
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

comp(19222..20139)
DNA (918bp) protein (306aa)
UPI0003D5CB6D related cluster Tax=unknown RepID=UPI0003D5CB6D
ABC transporter related protein {ECO:0000313|EMBL:KKW00953.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
ABC transporter
S_p2_S4_coassembly_k141_2676400_23
R_OD1_58_14, Parcubacteria, Bacteria

Not on your lists

comp(20181..20801)
DNA (621bp) protein (207aa)
Putative uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TK25_9CHLR bin=RAAC2_WWE3 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RAAC2_WWE3 organism_group=WWE3
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_58_14_curated
S_p2_S4_coassembly_k141_2676400_24
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(20798..21394)
DNA (597bp) protein (199aa)
hypothetical protein Tax=Streptomyces RepID=UPI000376C9E4
Transcriptional regulator, MarR family {ECO:0000313|EMBL:KKQ85817.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_7.;"
MarR family transcriptional regulator
S_p2_S4_coassembly_k141_2676400_25
unknown

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comp(21537..22124)
DNA (588bp) protein (196aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2676400_26
unknown

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comp(22139..22771)
DNA (633bp) protein (211aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2676400_27
unknown

Not on your lists

22938..23168
DNA (231bp) protein (77aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2676400_28
unknown

Not on your lists

23186..23419
DNA (234bp) protein (78aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2676400_29
unknown

Not on your lists

23578..24117
DNA (540bp) protein (180aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2676400_30
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(24261..25826)
DNA (1566bp) protein (522aa)
carboxypeptidase Tax=Verrucomicrobium spinosum RepID=UPI0001746024
carboxypeptidase Taq
Tax=RBG_16_Planctomycetes_64_12_curated
Displaying items 1-30 of 81 in total

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