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S_p2_S4_coassembly_k141_1446641

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_1446641_1
CG_Omnitr_02, Omnitrophica, Bacteria

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comp(3..1574)
DNA (1572bp) protein (524aa)
hsdR1; type I restriction-modification enzyme, subunit R (EC:3.1.21.3)
type I restriction endonuclease Tax=unclassified Aminicenantes RepID=UPI0003B75B2B
Tax=CG_Omnitr_02
S_p2_S4_coassembly_k141_1446641_2

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comp(1561..2379)
DNA (819bp) protein (273aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN31890.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein bin=GWF2_Lentisphaerae_49_21 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
S_p2_S4_coassembly_k141_1446641_3
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2376..2993)
DNA (618bp) protein (206aa)
Type I restriction-modification system, specificity subunit S (EC:3.1.21.3)
Type I restriction-modification system, specificity subunit S {ECO:0000313|EMBL:AKB58862.1}; EC=3.1.21.3 {ECO:0000313|EMBL:AKB58862.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 227.;"
Restriction modification system DNA specificity domain protein Tax=Helicobacter cetorum (strain ATCC BAA-540 / MIT 99-5656) RepID=I0ESD0_HELCM
S_p2_S4_coassembly_k141_1446641_4

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comp(2990..3577)
DNA (588bp) protein (196aa)
Restriction modification system DNA specificity domain protein Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KRG3_ARCVS
Marine sediment metagenome DNA, contig: S03H2_L00076 {ECO:0000313|EMBL:GAH27320.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
restriction modification system DNA specificity domain-containing protein
S_p2_S4_coassembly_k141_1446641_5
Methanococcus voltae, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(3574..4167)
DNA (594bp) protein (198aa)
Uncharacterized protein Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DSL8_METV3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI36128.1}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus voltae (strain ATCC BAA-1334 / A3).;"
S_p2_S4_coassembly_k141_1446641_6
Methanococcus voltae, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(4170..5051)
DNA (882bp) protein (294aa)
Uncharacterized protein Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DSL9_METV3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI36129.1}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus voltae (strain ATCC BAA-1334 / A3).;"
S_p2_S4_coassembly_k141_1446641_7
CG_Elusi_03, Elusimicrobia, Bacteria

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comp(5052..6845)
DNA (1794bp) protein (598aa)
hsdM1; type I restriction-modification enzyme, subunit M (EC:3.1.21.3)
type I restriction endonuclease subunit M Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B37500
Tax=CG_Elusi_03
S_p2_S4_coassembly_k141_1446641_8
GWA2_OD1_Kaiserbacteria_50_9_curated, Kaiserbacteria, Parcubacteria, Bacteria

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comp(7099..7797)
DNA (699bp) protein (233aa)
Putative membrane protein Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JJZ5_SYNJB
hypothetical protein
Tax=GWA2_OD1_Kaiserbacteria_50_9_curated
S_p2_S4_coassembly_k141_1446641_9
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7976..8824)
DNA (849bp) protein (283aa)
prophage antirepressor bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
prophage antirepressor
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
S_p2_S4_coassembly_k141_1446641_trna_4
unknown

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comp(9036..9180)
DNA (145bp)
transferRNA Arg
S_p2_S4_coassembly_k141_1446641_10
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(9273..10427)
DNA (1155bp) protein (385aa)
Uncharacterized RNA methyltransferase TTE1797; EC=2.1.1.-;; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 /; JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis).;"
Uncharacterized RNA methyltransferase TTE1797 Tax=Caldanaerobacter subterraneus RepID=Y1797_THETN
TrmA; SAM-dependent methyltransferase
S_p2_S4_coassembly_k141_1446641_11
AR10, Diapherotrites, DPANN, Archaea

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comp(10508..11488)
DNA (981bp) protein (327aa)
hypothetical protein
transmembrane_regions bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_1446641_12
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

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comp(11600..12346)
DNA (747bp) protein (249aa)
ATPdependent metallopeptidase HflB subfamily protein Tax=Acanthamoeba castellanii str. Neff RepID=L8GQA9_ACACA
ATPdependent metallopeptidase HflB subfamily protein {ECO:0000313|EMBL:ELR14316.1}; species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii str. Neff.;"
heavy metal ABC transporter substrate-binding protein
S_p2_S4_coassembly_k141_1446641_trna_1
unknown

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12534..12617
DNA (84bp)
transferRNA Leu
S_p2_S4_coassembly_k141_1446641_13
unknown

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12654..12950
DNA (297bp) protein (99aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1446641_14
AR10, Diapherotrites, DPANN, Archaea

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comp(12962..13387)
DNA (426bp) protein (142aa)
Hit-like protein involved in cell-cycle regulation
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation bin=GW2011_AR10_complete species=Ignicoccus hospitalis genus=Ignicoccus taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_1446641_15
GWA2_OD1_Kaiserbacteria_50_9_curated, Kaiserbacteria, Parcubacteria, Bacteria

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comp(13451..14011)
DNA (561bp) protein (187aa)
FKBP-type peptidyl-prolyl cis-trans isomerase; K01802 peptidylprolyl isomerase [EC:5.2.1.8] bin=AR5_curated_draft species=Methanocella paludicola genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC:5.2.1.8)
Tax=GWA2_OD1_Kaiserbacteria_50_9_curated
S_p2_S4_coassembly_k141_1446641_16
unknown

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comp(14091..14660)
DNA (570bp) protein (190aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1446641_17
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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15036..17078
DNA (2043bp) protein (681aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Flags: Precursor;; species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c).;"
K(+)-insensitive pyrophosphate-energized proton pump Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GJH9_METPE
S_p2_S4_coassembly_k141_1446641_18
unknown

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comp(17139..18152)
DNA (1014bp) protein (338aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1446641_19
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

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18323..18853
DNA (531bp) protein (177aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
Peptide methionine sulfoxide reductase MsrA Tax=Desmospora sp. 8437 RepID=F5SKU2_9BACL
methionine sulfoxide reductase A
S_p2_S4_coassembly_k141_1446641_20
unknown

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18923..19486
DNA (564bp) protein (188aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1446641_21
unknown

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comp(19566..19850)
DNA (285bp) protein (95aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1446641_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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19966..20118
DNA (153bp) protein (51aa)
fused DNA topoisomerase I/SWI domain-containing protein bin=AR5_curated_draft species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
fused DNA topoisomerase I/SWI domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
S_p2_S4_coassembly_k141_1446641_23

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comp(20230..20913)
DNA (684bp) protein (228aa)
Marine sediment metagenome DNA, contig: S01H1_L00161 {ECO:0000313|EMBL:GAF79333.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S_p2_S4_coassembly_k141_1446641_24
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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comp(20910..21554)
DNA (645bp) protein (215aa)
Tax=RBG_16_Thaumarchaeota_49_8_curated
S_p2_S4_coassembly_k141_1446641_trna_3
unknown

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comp(22148..22233)
DNA (86bp)
transferRNA Ser
S_p2_S4_coassembly_k141_1446641_25
GWA2_OD1_Kaiserbacteria_50_9_curated, Kaiserbacteria, Parcubacteria, Bacteria

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comp(22285..22938)
DNA (654bp) protein (218aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
ribulose-phosphate 3-epimerase ; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=GWA2_OD1_Kaiserbacteria_50_9_curated
S_p2_S4_coassembly_k141_1446641_26
GWA2_OD1_Kaiserbacteria_50_9_curated, Kaiserbacteria, Parcubacteria, Bacteria

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comp(22979..23710)
DNA (732bp) protein (244aa)
Glycine cleavage system protein T Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VZ91_9EURY
glycine cleavage system protein T
Tax=GWA2_OD1_Kaiserbacteria_50_9_curated
S_p2_S4_coassembly_k141_1446641_27
unknown

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23930..24100
DNA (171bp) protein (57aa)

This feature has no annotations

Displaying items 1-30 of 76 in total

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