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S_p2_S4_coassembly_k141_2766918

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_2766918_trna_1
unknown

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282..353
DNA (72bp)
transferRNA His
S_p2_S4_coassembly_k141_2766918_1

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427..1677
DNA (1251bp) protein (417aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p2_S4_coassembly_k141_2766918_trna_2
unknown

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1726..1798
DNA (73bp)
transferRNA Thr
S_p2_S4_coassembly_k141_2766918_2
AR10, Diapherotrites, DPANN, Archaea

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2006..2152
DNA (147bp) protein (49aa)
hypothetical protein
hypothetical protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_2766918_3
AR10, Diapherotrites, DPANN, Archaea

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2228..2950
DNA (723bp) protein (241aa)
ribose 5-phosphate isomerase A (EC:5.3.1.6)
ribose 5-phosphate isomerase (EC:5.3.1.6); K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_2766918_trna_3
unknown

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3114..3187
DNA (74bp)
transferRNA Met
S_p2_S4_coassembly_k141_2766918_4
unknown

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comp(3125..4036)
DNA (912bp) protein (304aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2766918_5
unknown

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comp(4143..4331)
DNA (189bp) protein (63aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2766918_6
unknown

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comp(4338..4697)
DNA (360bp) protein (120aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2766918_7
unknown

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comp(4702..4878)
DNA (177bp) protein (59aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2766918_8
AR10, Diapherotrites, DPANN, Archaea

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comp(4883..5239)
DNA (357bp) protein (119aa)
hypothetical protein
transmembrane_regions bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_2766918_9
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

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comp(5917..6357)
DNA (441bp) protein (147aa)
Predicted nucleic acid-binding protein bin=GWA2_Ignavibacteria_55_11 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
twitching motility protein PilT
Tax=GWF2_WOR_2_43_52_curated
S_p2_S4_coassembly_k141_2766918_10
R_WOR_2_48_11, WOR-2, Bacteria

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6631..7419
DNA (789bp) protein (263aa)
Band 7 protein bin=GWF2_Lentisphaerae_50_93 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
SPFH domain-containing protein/band 7 family protein
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
S_p2_S4_coassembly_k141_2766918_11
unknown

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comp(7495..8139)
DNA (645bp) protein (215aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2766918_trna_4
unknown

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8544..8634
DNA (91bp)
transferRNA Thr
S_p2_S4_coassembly_k141_2766918_12
unknown

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8716..11490
DNA (2775bp) protein (925aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2766918_13
AR10, Diapherotrites, DPANN, Archaea

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11769..12209
DNA (441bp) protein (147aa)
hypothetical protein
Protein of unknown function DUF2666 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_2766918_14

Not on your lists

12215..13063
DNA (849bp) protein (283aa)
phosphoesterase PA-phosphatase-like protein
phosphoesterase PA-phosphatase-like protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Phosphoesterase PA-phosphatase-like protein {ECO:0000313|EMBL:AJF60281.1}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p2_S4_coassembly_k141_2766918_15
AR10, Diapherotrites, DPANN, Archaea

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comp(13609..14790)
DNA (1182bp) protein (394aa)
succinyl-diaminopimelate desuccinylase (EC:3.5.1.18)
succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] bin=GW2011_AR10_complete species=Candidatus Korarchaeum cryptofilum genus=Candidatus Korarchaeum taxon_order=unknown taxon_class=unknown phylum=Korarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_2766918_16

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comp(14797..15684)
DNA (888bp) protein (296aa)
rimK; ribosomal protein S6 modification protein
rimK; ribosomal protein S6 modification protein; K05844 ribosomal protein S6 modification protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Ribosomal protein S6 modification protein {ECO:0000313|EMBL:AJF59934.1}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p2_S4_coassembly_k141_2766918_17

Not on your lists

comp(15684..16517)
DNA (834bp) protein (278aa)
hypothetical protein
Glutathione synthetase ATP-binding domain-like bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF59935.1}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p2_S4_coassembly_k141_2766918_18
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(16596..18134)
DNA (1539bp) protein (513aa)
Small-conductance mechanosensitive channel
Small-conductance mechanosensitive channel bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_2766918_19

Not on your lists

18299..19102
DNA (804bp) protein (268aa)
ribosomal protein S6 modification protein
alpha-L-glutamate ligase; K05844 ribosomal protein S6 modification protein bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Ribosomal protein S6 modification protein {ECO:0000313|EMBL:AJF59937.1}; species="Archaea.;" source="archaeon GW2011_AR10.;"
S_p2_S4_coassembly_k141_2766918_20
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(19194..20564)
DNA (1371bp) protein (457aa)
sucrose-phosphate synthase (EC:2.4.1.14)
Sucrose-phosphate synthase Tax=Desulfococcus multivorans DSM 2059 RepID=S7V5D2_DESML
Sucrose-phosphate synthase {ECO:0000313|EMBL:EPR41864.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
S_p2_S4_coassembly_k141_2766918_21
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(20565..21356)
DNA (792bp) protein (264aa)
alpha-amylase (EC:3.2.1.1)
Malto-oligosyltrehalose trehalohydrolase Tax=Rhodopirellula baltica SH28 RepID=K5E3T0_RHOBT
Malto-oligosyltrehalose trehalohydrolase {ECO:0000313|EMBL:EKK00451.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SH28.;"
S_p2_S4_coassembly_k141_2766918_22

Not on your lists

comp(21376..22443)
DNA (1068bp) protein (356aa)
Marine sediment metagenome DNA, contig: S01H1_L05969 {ECO:0000313|EMBL:GAF69391.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
mechanosensitive ion channel protein MscS bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
MscS Mechanosensitive ion channel
Displaying 26 items

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