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S5_GD2017_2_S2_scaffold_428

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_GD2017_2_S2_scaffold_428_1
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1847)
DNA (1845bp) protein (615aa)
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
S5_GD2017_2_S2_scaffold_428_2
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2000..3982)
DNA (1983bp) protein (661aa)
Acetyl-coenzyme A synthetase Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D0C3_PELTS
Acs; acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
S5_GD2017_2_S2_scaffold_428_3
R_Proteobacteria_53_8, Proteobacteria, Bacteria

Not on your lists

comp(4073..5872)
DNA (1800bp) protein (600aa)
Lytic transglycosylase catalytic Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QEI2_DESB2
Lytic transglycosylase catalytic
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
S5_GD2017_2_S2_scaffold_428_4
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5939..7192)
DNA (1254bp) protein (418aa)
Cell division protein FtsZ bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
cell division protein FtsZ
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curated
S5_GD2017_2_S2_scaffold_428_5
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7209..8438)
DNA (1230bp) protein (410aa)
Cell division protein ftsA Tax=Geobacter metallireducens RepID=Q39YL5_GEOMG
ftsA; cell division protein FtsA
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curated
S5_GD2017_2_S2_scaffold_428_6
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8563..9339)
DNA (777bp) protein (259aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YBV7_9DELT
polypeptide-transport-associated domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
S5_GD2017_2_S2_scaffold_428_7
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9347..10255)
DNA (909bp) protein (303aa)
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S2I6_THEOJ
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
S5_GD2017_2_S2_scaffold_428_8
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10252..11574)
DNA (1323bp) protein (441aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8); K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] bin=bin5_DeltaP species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
murC; UDP-N-acetylmuramate--L-alanine ligase
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
S5_GD2017_2_S2_scaffold_428_9
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11631..12719)
DNA (1089bp) protein (363aa)
murG; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CLU2_MYXFH
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
S5_GD2017_2_S2_scaffold_428_10
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12725..13852)
DNA (1128bp) protein (376aa)
Cell division-specific peptidoglycan biosynthesis regulator FtsW bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
ftsW; cell division protein FtsW
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
S5_GD2017_2_S2_scaffold_428_11
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13858..15084)
DNA (1227bp) protein (409aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=MURD_GEODF
UDP-N-acetylmuramoylalanine--D-glutamate ligase
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
S5_GD2017_2_S2_scaffold_428_12
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15105..16184)
DNA (1080bp) protein (360aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase Tax=sediment metagenome RepID=D9PIE5_9ZZZZ
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
S5_GD2017_2_S2_scaffold_428_13
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16188..17624)
DNA (1437bp) protein (479aa)
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF (EC:6.3.2.10)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase Tax=sediment metagenome RepID=D9PIE6_9ZZZZ
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
S5_GD2017_2_S2_scaffold_428_14
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17628..19145)
DNA (1518bp) protein (506aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase Tax=sediment metagenome RepID=D9PIE7_9ZZZZ
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
S5_GD2017_2_S2_scaffold_428_15
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19157..21157)
DNA (2001bp) protein (667aa)
Peptidoglycan transglycosylase and transpeptidase FtsI bin=GWC2_Deltaproteobacteria_55_46 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
ftsI; peptidoglycan transglycosylase and transpeptidase FtsI
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
S5_GD2017_2_S2_scaffold_428_16
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21171..21530)
DNA (360bp) protein (120aa)
Cell division protein FtsL Tax=sediment metagenome RepID=D9PJW0_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
S5_GD2017_2_S2_scaffold_428_17
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21503..22399)
DNA (897bp) protein (299aa)
Ribosomal RNA small subunit methyltransferase H Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AE65_THEID
S-adenosyl-methyltransferase MraW
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
S5_GD2017_2_S2_scaffold_428_18
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22403..22843)
DNA (441bp) protein (147aa)
mraZ; cell division protein MraZ; K03925 MraZ protein bin=ACD73 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
mraZ; cell division protein MraZ
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
S5_GD2017_2_S2_scaffold_428_trna_1
unknown

Not on your lists

23189..23273
DNA (85bp)
transferRNA Ser
S5_GD2017_2_S2_scaffold_428_19
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23376..24275
DNA (900bp) protein (300aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YB66_9DELT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curated
S5_GD2017_2_S2_scaffold_428_20
unknown

Not on your lists

comp(24309..24437)
DNA (129bp) protein (43aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_428_21

Not on your lists

comp(24415..24990)
DNA (576bp) protein (192aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2ARF6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD52374.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
S5_GD2017_2_S2_scaffold_428_22
unknown

Not on your lists

25157..26002
DNA (846bp) protein (282aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_428_23
R_Gammaproteobacteria_42_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26117..26518
DNA (402bp) protein (134aa)
Nucleotidyltransferase substrate binding protein, HI0074 family Tax=uncultured bacterium RepID=K1XRM7_9BACT
nucleotidyltransferase substrate binding protein, HI0074 family
Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_42_13_curated
S5_GD2017_2_S2_scaffold_428_24

Not on your lists

26515..26844
DNA (330bp) protein (110aa)
Type I restriction-modification system, S subunit/Type I restriction modification DNA specificity Tax=uncultured bacterium RepID=K1ZJJ3_9BACT
Type I restriction-modification system, S subunit/Type I restriction modification DNA specificity {ECO:0000313|EMBL:EKD55605.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
S5_GD2017_2_S2_scaffold_428_25
R_Deltaproteobacteria_46_8, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26841..27161
DNA (321bp) protein (107aa)
Putative uncharacterized protein (Fragment) bin=GWF2_Melioribacter_38_21 species=Bacillus amyloliquefaciens genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_46_8_curated
S5_GD2017_2_S2_scaffold_428_26
Prochlorococcus sp. MIT 0701, Prochlorococcus, Prochlorales, Cyanobacteria, Bacteria

Not on your lists

27158..28045
DNA (888bp) protein (296aa)
Possible Adenosine-deaminase (Editase) domain Tax=Prochlorococcus marinus (strain MIT 9313) RepID=Q7TUU9_PROMM
Putative Adenosine-deaminase (Editase) domain {ECO:0000313|EMBL:KGG25645.1}; species="Bacteria; Cyanobacteria; Prochlorales; Prochlorococcaceae; Prochlorococcus.;" source="Prochlorococcus sp. MIT 0701.;"
adenosine-deaminase
S5_GD2017_2_S2_scaffold_428_27
unknown

Not on your lists

28381..29157
DNA (777bp) protein (259aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_428_28
Caldisericum exile, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria

Not on your lists

29154..29966
DNA (813bp) protein (271aa)
dnaB; replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase {ECO:0000313|EMBL:BAL80459.1}; EC=3.6.1.- {ECO:0000313|EMBL:BAL80459.1};; species="Bacteria; Caldiserica; Caldisericia; Caldisericales; Caldisericaceae; Caldisericum.;" source="Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01).;"
Replicative DNA helicase Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GI72_CALEA
S5_GD2017_2_S2_scaffold_428_29
unknown

Not on your lists

30058..30534
DNA (477bp) protein (159aa)

This feature has no annotations

Displaying items 1-30 of 39 in total

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