ggKbase home page

SR2-18-S2p5_coassembly_scaffold_246697

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-S2p5_coassembly_scaffold_246697_1
Methylophaga aminisulfidivorans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118..477)
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5SZP5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGL54472.1}; TaxID=1026882 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga aminisulfidivorans MP.;"
hypothetical protein
SR2-18-S2p5_coassembly_scaffold_246697_2
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(603..950)
DNA (348bp) protein (116aa)
Tax=RBG_16_Archaea_50_20_curated
SR2-18-S2p5_coassembly_scaffold_246697_3
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1030..1233)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Pantoea ananatis LMG 5342 RepID=G9AML6_PANAN
Contig59, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76573.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
SR2-18-S2p5_coassembly_scaffold_246697_4
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(1402..2088)
DNA (687bp) protein (229aa)
Short-chain dehydrogenase/reductase SDR id=3409998 bin=GWA2_Ignavibacteria_55_11 species=Marinobacter santoriniensis genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
short-chain dehydrogenase/reductase SDR
Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
SR2-18-S2p5_coassembly_scaffold_246697_5
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(2099..3079)
DNA (981bp) protein (327aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U7B1_9CHLR
qor; putative zinc-binding oxidoreductase
Tax=RBG_16_Chloroflexi_57_11_curated
SR2-18-S2p5_coassembly_scaffold_246697_6
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(3211..3435)
DNA (225bp) protein (75aa)
hypothetical protein MsalJ2_00510 id=2113358 bin=GWB2_Chloroflexi_54_36 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=RBG_16_Chloroflexi_54_18_curated
SR2-18-S2p5_coassembly_scaffold_246697_7
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(3484..4491)
DNA (1008bp) protein (336aa)
hypothetical protein id=2269221 bin=GWB2_Chloroflexi_54_36 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=RBG_16_Chloroflexi_54_18_curated
SR2-18-S2p5_coassembly_scaffold_246697_8
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(4493..5038)
DNA (546bp) protein (182aa)
Uncharacterized protein n=3 Tax=Rhodopirellula baltica RepID=F2AZJ9_RHOBT
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
SR2-18-S2p5_coassembly_scaffold_246697_9
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(5152..5682)
DNA (531bp) protein (177aa)
putative RNA polymerase sigma factor id=2269223 bin=GWB2_Chloroflexi_54_36 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
sigW; RNA polymerase sigma factor SigW
Tax=CG_Anaero_01
SR2-18-S2p5_coassembly_scaffold_246697_10
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5842..6567)
DNA (726bp) protein (242aa)
Putative uncharacterized protein id=3979305 bin=GWF2_Bacteroidetes_33_16 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
Putative redox-active protein (C_GCAxxG_C_C)
Tax=RBG_16_Anaeromyxobacter_69_14_curated
SR2-18-S2p5_coassembly_scaffold_246697_11
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(6613..6951)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0C3S9_ACAM1
hypothetical protein
Tax=RBG_16_Chloroflexi_57_11_curated
SR2-18-S2p5_coassembly_scaffold_246697_12
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7076..9784)
DNA (2709bp) protein (903aa)
transcriptional regulator n=1 Tax=Paenibacillus elgii RepID=UPI000248DD86
Transcriptional regulator {ECO:0000313|EMBL:AJY73548.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
transcriptional regulator
SR2-18-S2p5_coassembly_scaffold_246697_13
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(10091..10420)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003095C31
antibiotic biosynthesis monooxygenase
Tax=BJP_IG2157_Anaerolineales_55_23
SR2-18-S2p5_coassembly_scaffold_246697_14
CG_CP02_01, CG_CP02, Bacteria

Not on your lists

comp(10436..11602)
DNA (1167bp) protein (389aa)
Proteinase inhibitor I4 serpin id=2098201 bin=GWB2_Desulfobacterales_56_26 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
proteinase inhibitor I4 serpin
Tax=CG_CP02_01
SR2-18-S2p5_coassembly_scaffold_246697_15
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(11606..11989)
DNA (384bp) protein (128aa)
Uncharacterized protein id=1860104 bin=GWD2_Chloroflexi_49_16 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=GWC2_Chloroflexi_49_37_curated
SR2-18-S2p5_coassembly_scaffold_246697_16

Not on your lists

comp(12004..12813)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003789F78
Uncharacterized protein {ECO:0000313|EMBL:KKM81951.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
type 11 methyltransferase
SR2-18-S2p5_coassembly_scaffold_246697_17
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(12849..13466)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JDS9_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EDY85193.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
SR2-18-S2p5_coassembly_scaffold_246697_18
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(13485..14627)
DNA (1143bp) protein (381aa)
Glycosyl transferase group 1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TD85_9CHLR
group 1 glycosyl transferase
Tax=RBG_13_Chloroflexi_56_8_curated
SR2-18-S2p5_coassembly_scaffold_246697_19
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14624..16963)
DNA (2340bp) protein (780aa)
beta-mannosidase (EC:3.2.1.25)
Beta-mannosidase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CXP2_HALOH
Tax=RBG_13_Deltaproteobacteria_61_14_curated
SR2-18-S2p5_coassembly_scaffold_246697_20
unknown

Not on your lists

comp(16960..17292)
DNA (333bp) protein (111aa)

This feature has no annotations

SR2-18-S2p5_coassembly_scaffold_246697_21
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(17299..19773)
DNA (2475bp) protein (825aa)
Putative uncharacterized protein id=1959962 bin=GWD2_RBX1-related_39_127 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR2-18-S2p5_coassembly_scaffold_246697_22
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

20024..21589
DNA (1566bp) protein (522aa)
Putative uncharacterized protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N5F2_ANATU
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR2-18-S2p5_coassembly_scaffold_246697_23
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

21621..22049
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2C9A2_9BACT
hypothetical protein
Tax=RBG_16_Chloroflexi_56_8_curated
SR2-18-S2p5_coassembly_scaffold_246697_trna_1
unknown

Not on your lists

22104..22186
DNA (83bp)
transferRNA Leu
SR2-18-S2p5_coassembly_scaffold_246697_24
unknown

Not on your lists

comp(22203..22550)
DNA (348bp) protein (116aa)

This feature has no annotations

SR2-18-S2p5_coassembly_scaffold_246697_25
RBG_16_OP11_Gottesmanbacteria_52_11_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(22646..24487)
DNA (1842bp) protein (614aa)
hypothetical protein n=1 Tax=Teredinibacter turnerae RepID=UPI000380E4EF
hypothetical protein
Tax=RBG_16_OP11_Gottesmanbacteria_52_11_curated
SR2-18-S2p5_coassembly_scaffold_246697_26
RBG_16_OP11_Gottesmanbacteria_52_11_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(24753..25559)
DNA (807bp) protein (269aa)
Tax=RBG_16_OP11_Gottesmanbacteria_52_11_curated
SR2-18-S2p5_coassembly_scaffold_246697_27
unknown

Not on your lists

comp(25650..26075)
DNA (426bp) protein (142aa)

This feature has no annotations

SR2-18-S2p5_coassembly_scaffold_246697_28
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(26727..27335)
DNA (609bp) protein (203aa)
AraD; L-fuculose phosphate aldolase (EC:4.1.2.17)
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D3S8_PELTS
Tax=RBG_16_Planctomycetes_59_8_curated
SR2-18-S2p5_coassembly_scaffold_246697_29
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(27398..29191)
DNA (1794bp) protein (598aa)
aor1; tungsten-containing aldehyde ferredoxin oxidoreductase (EC:1.2.7.-)
Aldehyde ferredoxin oxidoreductase, tungsten-containing n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ADZ1_CARHZ
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
Displaying items 1-30 of 55 in total

View Taxonomy