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SR2-18-B1_coassembly_138856

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-B1_coassembly_138856_1
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(3..233)
-----------------
DNA (231bp)
protein (77aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B52F59
putative methyltransferase
Tax=RBG_16_Spirochaete_67_19_curated
SR2-18-B1_coassembly_138856_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(298..1737)
-----------------
DNA (1440bp)
protein (480aa)
TonB-dependent receptor, plug id=12557259 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
TonB-dependent receptor, plug
TonB-dependent receptor, plug {ECO:0000313|EMBL:ABJ86614.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_138856_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(1756..3579)
-----------------
DNA (1824bp)
protein (608aa)
TonB-dependent receptor, plug n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028T2_SOLUE
TonB-dependent receptor, plug
TonB-dependent receptor, plug {ECO:0000313|EMBL:ABJ82470.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_138856_4
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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4026..5039
-----------------
DNA (1014bp)
protein (338aa)
LacI family transcription regulator n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFL3_9BACT
LacI family transcription regulator {ECO:0000313|EMBL:BAL54949.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
LacI family transcriptional regulator
SR2-18-B1_coassembly_138856_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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5039..5599
-----------------
DNA (561bp)
protein (187aa)
Myo-inositol catabolism IolB domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028T0_SOLUE
myo-inositol catabolism IolB domain-containing protein
Myo-inositol catabolism IolB domain protein {ECO:0000313|EMBL:ABJ82472.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_138856_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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5545..6006
-----------------
DNA (462bp)
protein (154aa)
Myo-inositol catabolism IolB domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028T0_SOLUE
myo-inositol catabolism IolB domain-containing protein
Myo-inositol catabolism IolB domain protein {ECO:0000313|EMBL:ABJ82472.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_138856_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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6016..6981
-----------------
DNA (966bp)
protein (322aa)
PfkB domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028S9_SOLUE
ribokinase-like domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:ABJ82473.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_138856_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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7007..8017
-----------------
DNA (1011bp)
protein (337aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028S8_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ82474.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_138856_9
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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8043..9962
-----------------
DNA (1920bp)
protein (640aa)
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFL0_9BACT
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase {ECO:0000313|EMBL:BAL54946.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
thiamine pyrophosphate binding domain-containing protein
SR2-18-B1_coassembly_138856_10

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9969..11444
-----------------
DNA (1476bp)
protein (492aa)
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:CBH99460.1}; EC=1.2.1.27 {ECO:0000313|EMBL:CBH99460.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=mine drainage metagenome RepID=E6PX01_9ZZZZ
methylmalonate-semialdehyde dehydrogenase
SR2-18-B1_coassembly_138856_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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11516..12451
-----------------
DNA (936bp)
protein (312aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028S6_SOLUE
xylose isomerase domain-containing protein
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ABJ82476.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_138856_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

12467..13498
-----------------
DNA (1032bp)
protein (344aa)
inositol 2-dehydrogenase (EC:1.1.1.18)
Inositol 2-dehydrogenase {ECO:0000313|EMBL:ABJ82477.1}; EC=1.1.1.18 {ECO:0000313|EMBL:ABJ82477.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Inositol 2-dehydrogenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028S5_SOLUE
SR2-18-B1_coassembly_138856_13
unknown

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comp(14023..14910)
-----------------
DNA (888bp)
protein (296aa)

This feature has no annotations

SR2-18-B1_coassembly_138856_14
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(15137..16381)
-----------------
DNA (1245bp)
protein (415aa)
glucose uptake permease n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B42309
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEU38109.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
SR2-18-B1_coassembly_138856_15
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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16567..16923
-----------------
DNA (357bp)
protein (119aa)
Putative uncharacterized protein id=15192440 bin=GWC2_NOV_55_46 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
hypothetical protein
Tax=GWC2_Deltaproteobacteria_55_46b_curated
SR2-18-B1_coassembly_138856_16
RLO_RIF05_58_11, RIF5, Bacteria

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comp(16920..18278)
-----------------
DNA (1359bp)
protein (453aa)
N-acetylgalactosamine-6-sulfatase (EC:3.1.6.4)
Sulfatase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF83_9BACT
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
SR2-18-B1_coassembly_138856_17
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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18320..19537
-----------------
DNA (1218bp)
protein (406aa)
Gluconate dehydratase {ECO:0000313|EMBL:EON75216.1}; EC=4.2.1.39 {ECO:0000313|EMBL:EON75216.1};; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036B0E78
mandelate racemase
SR2-18-B1_coassembly_138856_18
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(19739..21016)
-----------------
DNA (1278bp)
protein (426aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UGU1_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC47243.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
SR2-18-B1_coassembly_138856_19
unknown

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comp(21315..21497)
-----------------
DNA (183bp)
protein (61aa)

This feature has no annotations

SR2-18-B1_coassembly_138856_20
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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21600..22637
-----------------
DNA (1038bp)
protein (346aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B2Q9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE84433.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
SR2-18-B1_coassembly_138856_21
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(22718..22807)
-----------------
DNA (90bp)
protein (30aa)
Oxidoreductase domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YL4_SOLUE
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABJ85251.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Displaying 21 items

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