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SR2-18-B1_coassembly_313728

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-B1_coassembly_313728_1
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(313..573)
-----------------
DNA (261bp)
protein (87aa)
Ankyrin repeat-containing protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUC6_SOLCM
ankyrin repeat-containing protein
Ankyrin repeat-containing protein {ECO:0000313|EMBL:AFD07291.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SR2-18-B1_coassembly_313728_2
Deinococcus maricopensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(584..1042)
-----------------
DNA (459bp)
protein (153aa)
ankyrin n=1 Tax=Deinococcus sp. 2009 RepID=UPI0003B33C77
ankyrin
Ankyrin {ECO:0000313|EMBL:ADV67893.1}; TaxID=709986 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946; / LB-34).;"
SR2-18-B1_coassembly_313728_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(1076..1942)
-----------------
DNA (867bp)
protein (289aa)
Transcriptional regulator, AraC family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Q17_SOLUE
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABJ88253.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_313728_4
unknown

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comp(2062..2976)
-----------------
DNA (915bp)
protein (305aa)

This feature has no annotations

SR2-18-B1_coassembly_313728_5
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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3088..4041
-----------------
DNA (954bp)
protein (318aa)
MutS domain protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F8T7_ACIC5
MutS domain-containing protein
MutS domain protein {ECO:0000313|EMBL:ACO32152.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
SR2-18-B1_coassembly_313728_6
unknown

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comp(3966..4112)
-----------------
DNA (147bp)
protein (49aa)

This feature has no annotations

SR2-18-B1_coassembly_313728_7
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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4209..5015
-----------------
DNA (807bp)
protein (269aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036DD059
Haloalkane dehalogenase 1 {ECO:0000313|EMBL:GAM46522.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
hydrolase
SR2-18-B1_coassembly_313728_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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5054..5833
-----------------
DNA (780bp)
protein (260aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U8G7_9CHLR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFH80178.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
enoyl-ACP reductase
SR2-18-B1_coassembly_313728_9
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5845..6588
-----------------
DNA (744bp)
protein (248aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KU83_HALH1
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEE50180.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SR2-18-B1_coassembly_313728_10
unknown

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6748..7461
-----------------
DNA (714bp)
protein (238aa)

This feature has no annotations

SR2-18-B1_coassembly_313728_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(7374..7796)
-----------------
DNA (423bp)
protein (141aa)
Putative esterase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026H6_SOLUE
esterase
Putative esterase {ECO:0000313|EMBL:ABJ83093.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_313728_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(7777..9615)
-----------------
DNA (1839bp)
protein (613aa)
Putative esterase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026H6_SOLUE
esterase
Putative esterase {ECO:0000313|EMBL:ABJ83093.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_313728_13

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comp(9625..10809)
-----------------
DNA (1185bp)
protein (395aa)
esterase n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A876B
Uncharacterized protein {ECO:0000313|EMBL:KKM98202.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
esterase
SR2-18-B1_coassembly_313728_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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10965..12872
-----------------
DNA (1908bp)
protein (636aa)
alpha-N-arabinofuranosidase (EC:3.2.1.55)
Alpha-N-arabinofuranosidase {ECO:0000313|EMBL:ABJ83090.1}; EC=3.2.1.55 {ECO:0000313|EMBL:ABJ83090.1};; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Alpha-N-arabinofuranosidase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026H9_SOLUE
SR2-18-B1_coassembly_313728_trna_1
unknown

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comp(13206..13283)
-----------------
DNA (78bp)
transferRNA Gln
SR2-18-B1_coassembly_313728_15
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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13389..13910
-----------------
DNA (522bp)
protein (174aa)
Putative transcriptional regulator n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C0U9_DESTA
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AFM23190.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
SR2-18-B1_coassembly_313728_16
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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13921..15366
-----------------
DNA (1446bp)
protein (482aa)
Sulfatase n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SP90_9BACL
Sulfatase {ECO:0000313|EMBL:EHQ59112.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiformis C454.;"
hypothetical protein
SR2-18-B1_coassembly_313728_17
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(15342..16046)
-----------------
DNA (705bp)
protein (235aa)
Amidotransferase, putative n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W4Q1_DYAFD
amidotransferase
Amidotransferase, putative {ECO:0000313|EMBL:ACT95875.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SR2-18-B1_coassembly_313728_18
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(16043..17437)
-----------------
DNA (1395bp)
protein (465aa)
aldehyde dehydrogenase n=1 Tax=Dyadobacter beijingensis RepID=UPI000376D782
aldehyde dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ACT95873.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SR2-18-B1_coassembly_313728_19
RLO_RIF02_62_27, RIF2, Bacteria

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comp(17576..18937)
-----------------
DNA (1362bp)
protein (454aa)
Uncharacterized protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BIV6_MEISD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
SR2-18-B1_coassembly_313728_20
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(18903..20294)
-----------------
DNA (1392bp)
protein (464aa)
Ethanolamine transporter n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PPD1_MEIRD
ethanolamine transporter
Ethanolamine transporter {ECO:0000313|EMBL:AGK04003.1}; TaxID=504728 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21); (Thermus ruber).;"
SR2-18-B1_coassembly_313728_21
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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20469..21161
-----------------
DNA (693bp)
protein (231aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003813181
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO34113.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
Displaying 22 items

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