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SR2-18-B1_coassembly_330634

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-B1_coassembly_330634_1
unknown

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1..189
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

SR2-18-B1_coassembly_330634_trna_1
unknown

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comp(238..309)
-----------------
DNA (72bp)
transferRNA Lys
SR2-18-B1_coassembly_330634_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(398..1843)
-----------------
DNA (1446bp)
protein (482aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
3-octaprenyl-4hydroxybenzoate decarboxylase {ECO:0000313|EMBL:ABJ84912.1}; EC=4.1.1.- {ECO:0000313|EMBL:ABJ84912.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
3-octaprenyl-4hydroxybenzoate decarboxylase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZK3_SOLUE
SR2-18-B1_coassembly_330634_3
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1905..2639
-----------------
DNA (735bp)
protein (245aa)
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ACO31747.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ACO31747.1};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003757125
SR2-18-B1_coassembly_330634_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2682..3053
-----------------
DNA (372bp)
protein (124aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V2H3_VARPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU35694.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SR2-18-B1_coassembly_330634_5
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3067..4275)
-----------------
DNA (1209bp)
protein (403aa)
Flp pilus assembly protein ATPase CpaE n=1 Tax=uncultured bacterium CSLF43 RepID=G4WW16_9BACT
response regulator receiver protein
Tax=GWF2_Verrucomicrobia_62_7_curated
SR2-18-B1_coassembly_330634_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(4392..5078)
-----------------
DNA (687bp)
protein (229aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000366E87E
radical SAM domain-containing protein
SR2-18-B1_coassembly_330634_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(5075..5755)
-----------------
DNA (681bp)
protein (227aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
7-cyano-7-deazaguanine synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CA1_SOLUE
exoenzyme S synthesis protein B
SR2-18-B1_coassembly_330634_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(5752..6906)
-----------------
DNA (1155bp)
protein (385aa)
Arabinose efflux permease n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIN5_CHLTF id=5225321 bin=16ft_combo_ws3_JS1 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
arabinose efflux permease
Tax=RBG_16_RIF_WS3X_71_46_curated
SR2-18-B1_coassembly_330634_9
unknown

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6955..9279
-----------------
DNA (2325bp)
protein (775aa)

This feature has no annotations

SR2-18-B1_coassembly_330634_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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9350..11362
-----------------
DNA (2013bp)
protein (671aa)
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EDY22105.1}; EC=2.7.13.3 {ECO:0000313|EMBL:EDY22105.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
dhkJ; hybrid signal transduction histidine kinase J (EC:2.7.13.3)
Multi-sensor hybrid histidine kinase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU67_9BACT
SR2-18-B1_coassembly_330634_11
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

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11510..13147
-----------------
DNA (1638bp)
protein (546aa)
Sensor histidine kinase response regulator, DUF3365, PAS, PAS and Hpt domain-containing, heme-binding n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AMD5_GEOSK
PAS domain S-box
Tax=CG_Delta_03
SR2-18-B1_coassembly_330634_12
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13166..14347
-----------------
DNA (1182bp)
protein (394aa)
multi-sensor hybrid histidine kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C53D1
response receiver sensor histidine kinase response regulator, PAS and GAF domain-containing
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
SR2-18-B1_coassembly_330634_13
unknown

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14609..14737
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

SR2-18-B1_coassembly_330634_14
Lysinibacillus massiliensis, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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14989..15330
-----------------
DNA (342bp)
protein (114aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F2EA12
ABC transporter {ECO:0000313|EMBL:KGR89679.1}; TaxID=1211035 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529.;"
ABC transporter-like protein
SR2-18-B1_coassembly_330634_15
unknown

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15305..16081
-----------------
DNA (777bp)
protein (259aa)

This feature has no annotations

SR2-18-B1_coassembly_330634_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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16193..17863
-----------------
DNA (1671bp)
protein (557aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UF5_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ86715.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_330634_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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17890..18471
-----------------
DNA (582bp)
protein (194aa)
Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02B56_SOLUE
respiratory-chain NADH dehydrogenase domain-containing protein
Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit {ECO:0000313|EMBL:ABJ81710.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Displaying 18 items

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