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SR2-18-B1_coassembly_492568

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-B1_coassembly_492568_1
unknown

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42..512
-----------------
DNA (471bp)
protein (157aa)

This feature has no annotations

SR2-18-B1_coassembly_492568_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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496..1614
-----------------
DNA (1119bp)
protein (373aa)
putative 3-carboxymuconate cyclase id=24524035 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
putative 3-carboxymuconate cyclase
Tax=RBG_16_RIF_WS3X_71_46_curated
SR2-18-B1_coassembly_492568_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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1796..2311
-----------------
DNA (516bp)
protein (172aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025Y6_SOLUE
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABJ83183.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_492568_4
unknown

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2308..3114
-----------------
DNA (807bp)
protein (269aa)

This feature has no annotations

SR2-18-B1_coassembly_492568_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3361..4998)
-----------------
DNA (1638bp)
protein (546aa)
Fis family transcriptional regulator n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7ULB9_MYXSD
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SR2-18-B1_coassembly_492568_6
Rhodopirellula baltica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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5185..5742
-----------------
DNA (558bp)
protein (186aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=993516 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula baltica SWK14.;"
Peroxidase-related enzyme n=1 Tax=Rhodopirellula baltica SWK14 RepID=L7C704_RHOBT
mip; hypothetical protein
SR2-18-B1_coassembly_492568_7
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5833..6249
-----------------
DNA (417bp)
protein (139aa)
Uncharacterized protein n=1 Tax=Cellvibrio sp. BR RepID=I3IEL3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIK46498.1}; TaxID=1134474 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.;"
hypothetical protein
SR2-18-B1_coassembly_492568_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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6261..6896
-----------------
DNA (636bp)
protein (212aa)
MOSC domain containing protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QK31_CATAD
MOSC domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SR2-18-B1_coassembly_492568_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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7102..7917
-----------------
DNA (816bp)
protein (272aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037668F3
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
SR2-18-B1_coassembly_492568_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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7921..8844
-----------------
DNA (924bp)
protein (308aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000378F9BF
sulfite oxidase subunit YedY
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
SR2-18-B1_coassembly_492568_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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8845..9501
-----------------
DNA (657bp)
protein (219aa)
Ferric reductase domain protein transmembrane component, N-terminal domain n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PH5_SOLUE
ferric reductase domain-containing protein
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000256|SAAS:SAAS00016679}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_492568_12
unknown

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9601..9768
-----------------
DNA (168bp)
protein (56aa)

This feature has no annotations

SR2-18-B1_coassembly_492568_13
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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9765..10325
-----------------
DNA (561bp)
protein (187aa)
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
SR2-18-B1_coassembly_492568_14
Synechococcus sp. PCC 7002, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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10455..11189
-----------------
DNA (735bp)
protein (245aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036496F4
hypothetical protein
Conserved hypothetical membrane protein {ECO:0000313|EMBL:ACB01160.1}; TaxID=32049 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum; quadruplicatum).;"
SR2-18-B1_coassembly_492568_15
unknown

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11442..12374
-----------------
DNA (933bp)
protein (311aa)

This feature has no annotations

SR2-18-B1_coassembly_492568_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12912..13964)
-----------------
DNA (1053bp)
protein (351aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6T4_GEOUR
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
SR2-18-B1_coassembly_492568_17
unknown

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comp(14012..14365)
-----------------
DNA (354bp)
protein (118aa)

This feature has no annotations

SR2-18-B1_coassembly_492568_18
unknown

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comp(14362..14808)
-----------------
DNA (447bp)
protein (149aa)

This feature has no annotations

SR2-18-B1_coassembly_492568_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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15011..15556
-----------------
DNA (546bp)
protein (182aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q24P75_DESHY
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
SR2-18-B1_coassembly_492568_20
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15553..16059
-----------------
DNA (507bp)
protein (169aa)
Bll7013 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89EQ9_BRADU
Uncharacterized protein {ECO:0000313|EMBL:KGJ63372.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
hypothetical protein
SR2-18-B1_coassembly_492568_21
unknown

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16118..16300
-----------------
DNA (183bp)
protein (61aa)

This feature has no annotations

SR2-18-B1_coassembly_492568_22
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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16291..17043
-----------------
DNA (753bp)
protein (251aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000316C3CE
Uncharacterized protein {ECO:0000313|EMBL:EZH74296.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
hypothetical protein
SR2-18-B1_coassembly_492568_23
unknown

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comp(17078..17593)
-----------------
DNA (516bp)
protein (172aa)

This feature has no annotations

SR2-18-B1_coassembly_492568_24
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(17590..18840)
-----------------
DNA (1251bp)
protein (417aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024X2_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ83454.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_492568_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(19113..20534)
-----------------
DNA (1422bp)
protein (474aa)
hypothetical protein PflaJ_01970 id=3267207 bin=GWF2_Bacteroidetes_49_14 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
SR2-18-B1_coassembly_492568_26
unknown

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20764..21090
-----------------
DNA (327bp)
protein (109aa)

This feature has no annotations

SR2-18-B1_coassembly_492568_27
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21048..21266)
-----------------
DNA (219bp)
protein (73aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036689FA
Chitinase {ECO:0000313|EMBL:GAD23335.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
fibronectin type III domain-containing protein
Displaying 27 items

View Taxonomy