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SR-2_scaffold_141_1712984

Search features with annotation key words

Displaying items 1-30 of 132 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-2_scaffold_141_1712984_1
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

257..1858
DNA (1602bp) protein (534aa)
Phospholipase D/Transphosphatidylase id=3285665 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
phospholipase D/transphosphatidylase
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
SR-2_scaffold_141_1712984_2
R_OP3X_45_10, OP3X, Bacteria

Not on your lists

comp(1860..2060)
DNA (201bp) protein (67aa)
hypothetical protein
Putative uncharacterized protein id=5800150 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
SR-2_scaffold_141_1712984_3
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(2057..5446)
DNA (3390bp) protein (1130aa)
Methylmalonyl-CoA mutase family protein id=2276808 bin=GWA2_Elusimicrobia_69_24 species=Mariniradius saccharolyticus genus=Mariniradius taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
methylmalonyl-CoA mutase
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_1712984_4
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5507..6463)
DNA (957bp) protein (319aa)
Tax=RBG_16_Gamma2_64_11_curated
SR-2_scaffold_141_1712984_5
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

comp(6492..7793)
DNA (1302bp) protein (434aa)
Tax=CG_Elusi_04
SR-2_scaffold_141_1712984_6
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(7816..9060)
DNA (1245bp) protein (415aa)
hypothetical protein; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] id=16980358 bin=RBG_16_Aminicenantes_63_14 species=Parachlamydia acanthamoebae genus=Parachlamydia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_1712984_7
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(9110..10513)
DNA (1404bp) protein (468aa)
Putative 3-hydroxyacyl-CoA dehydrogenase id=2276817 bin=GWA2_Elusimicrobia_69_24 species=Waddlia chondrophila genus=Waddlia taxon_order=Chlamydiales taxon_class=Chlamydiia phylum=Chlamydiae tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hbd; 3-hydroxybutyryl-CoA dehydrogenase
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_1712984_8
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10516..11286)
DNA (771bp) protein (257aa)
crt2; 3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
3-hydroxybutyryl-CoA dehydratase id=2276818 bin=GWA2_Elusimicrobia_69_24 species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_1712984_9
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(11283..12428)
DNA (1146bp) protein (382aa)
ivd; isovaleryl-CoA dehydrogenase (EC:1.3.99.10)
Acyl-CoA dehydrogenase id=2276821 bin=GWA2_Elusimicrobia_69_24 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_1712984_10
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(12515..14728)
DNA (2214bp) protein (738aa)
Probable butyrate kinase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P350_9BACT
phosphate acetyltransferase
Tax=RBG_13_Acidobacteria_68_16_curated
SR-2_scaffold_141_1712984_11
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

14775..15920
DNA (1146bp) protein (382aa)
Acyl-CoA dehydrogenase domain protein id=4999502 bin=GWA2_Elusimicrobia_69_24 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
acyl-CoA dehydrogenase domain-containing protein
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_1712984_12
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

15917..16756
DNA (840bp) protein (280aa)
Electron transfer flavoprotein beta-subunit id=4999503 bin=GWA2_Elusimicrobia_69_24 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
FixA; electron transfer flavoprotein, beta subunit
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_1712984_13
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

16753..19386
DNA (2634bp) protein (878aa)
Aromatic ring hydroxylase id=4999504 bin=GWA2_Elusimicrobia_69_24 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
aromatic ring hydroxylase
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_1712984_14
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

19392..19952
DNA (561bp) protein (187aa)
Nitroreductase id=4999505 bin=GWA2_Elusimicrobia_69_24 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
nitroreductase
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_1712984_15
unknown

Not on your lists

19980..20732
DNA (753bp) protein (251aa)

This feature has no annotations

SR-2_scaffold_141_1712984_16
BJP_08E140C01_Elusimicrobia_64_11, Elusimicrobia lineage IV, Elusimicrobia, Bacteria

Not on your lists

20742..21578
DNA (837bp) protein (279aa)
THIF family protein id=2908236 bin=GWA1_Deltaproteobacteria_52_35 species=Bdellovibrio exovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
THIF family protein
Tax=BJP_08E140C01_Elusimicrobia_64_11
SR-2_scaffold_141_1712984_17
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

21623..22936
DNA (1314bp) protein (438aa)
proton/peptide symporter family protein id=24458837 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Amino acid/peptide transporter {ECO:0000313|EMBL:EHO43362.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
tppB; amino acid/peptide transporter
SR-2_scaffold_141_1712984_18
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(22958..23461)
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TEA2_HELMI
hypothetical protein
Tax=RBG_13_Ignavibacteria_36_8_curated
SR-2_scaffold_141_1712984_19
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

23694..24965
DNA (1272bp) protein (424aa)
HNH endonuclease id=5019297 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
HNH endonuclease
Tax=CG_Elusi_04
SR-2_scaffold_141_1712984_20
RBG_16_Bdellovibrionales_40_8_curated, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(25161..25787)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RXM5_9BRAD
Tax=RBG_16_Bdellovibrionales_40_8_curated
SR-2_scaffold_141_1712984_21
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25862..27919
DNA (2058bp) protein (686aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI00035E3A6D
pyruvate/2-oxoglutarate dehydrogenase complex
Pyruvate/2-oxoglutarate dehydrogenase complex {ECO:0000313|EMBL:BAE48877.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
SR-2_scaffold_141_1712984_22
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

27909..29006
DNA (1098bp) protein (366aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component id=3367891 bin=GWA2_Elusimicrobia_66_18 species=Stanieria cyanosphaera genus=Stanieria taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
Tax=CG_Elusi_04
SR-2_scaffold_141_1712984_23
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

29062..29790
DNA (729bp) protein (243aa)
phosphopantetheinyl transferase (holo-ACP synthase) id=3367892 bin=GWA2_Elusimicrobia_66_18 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
phosphopantetheine-protein transferase
Tax=GWC2_Elusimicrobia_65_9_curated
SR-2_scaffold_141_1712984_24
unknown

Not on your lists

comp(29875..30933)
DNA (1059bp) protein (353aa)

This feature has no annotations

SR-2_scaffold_141_1712984_25
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(30992..32584)
DNA (1593bp) protein (531aa)
hypothetical protein id=1765628 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
PE-PGRS family protein
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_1712984_26
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(32568..33740)
DNA (1173bp) protein (391aa)
Putative uncharacterized protein id=3368034 bin=GWA2_Elusimicrobia_66_18 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=GWC2_Elusimicrobia_65_9_curated
SR-2_scaffold_141_1712984_27
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(33737..34762)
DNA (1026bp) protein (342aa)
Putative uncharacterized protein id=3368034 bin=GWA2_Elusimicrobia_66_18 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
Tax=GWC2_Elusimicrobia_65_9_curated
SR-2_scaffold_141_1712984_28
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

35048..36643
DNA (1596bp) protein (532aa)
Response regulator receiver domain protein id=4163440 bin=GWC2_Elusimicrobia_64_44 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
response regulator receiver sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
SR-2_scaffold_141_1712984_29
unknown

Not on your lists

comp(36618..37028)
DNA (411bp) protein (137aa)

This feature has no annotations

SR-2_scaffold_141_1712984_30
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(37054..38004)
DNA (951bp) protein (317aa)
Protein kinase id=1718658 bin=GWA2_Elusimicrobia_66_18 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
serine/threonine protein kinase with PASTA sensor(s)
Tax=RBG_16_Elusimicrobia_66_12_curated
Displaying items 1-30 of 132 in total

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