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SR-2_scaffold_141_2396028

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-2_scaffold_141_2396028_1
unknown

Not on your lists

comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

SR-2_scaffold_141_2396028_2
unknown

Not on your lists

150..590
DNA (441bp) protein (147aa)

This feature has no annotations

SR-2_scaffold_141_2396028_3
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

640..1110
DNA (471bp) protein (157aa)
Arginine repressor id=2300277 bin=GWA2_Elusimicrobia_69_24 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
argR; arginine repressor ArgR
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
SR-2_scaffold_141_2396028_4
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

1107..2399
DNA (1293bp) protein (431aa)
argG; argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase id=2300276 bin=GWA2_Elusimicrobia_69_24 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RBG_16_Elusimicrobia_66_12_curated
SR-2_scaffold_141_2396028_5
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

2396..3445
DNA (1050bp) protein (350aa)
Uncharacterized protein id=2300275 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=RBG_16_Elusimicrobia_66_12_curated
SR-2_scaffold_141_2396028_6
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

3442..4470
DNA (1029bp) protein (343aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase id=2300274 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
SR-2_scaffold_141_2396028_7
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

4479..5519
DNA (1041bp) protein (347aa)
Ornithine carbamoyltransferase id=2300272 bin=GWA2_Elusimicrobia_69_24 species=Salinibacter ruber genus=Salinibacter taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
ornithine carbamoyltransferase
Tax=RBG_16_Elusimicrobia_66_12_curated
SR-2_scaffold_141_2396028_8
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

5516..6436
DNA (921bp) protein (307aa)
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase id=2300271 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
SR-2_scaffold_141_2396028_9
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

6433..7485
DNA (1053bp) protein (351aa)
Acetylornithine deacetylase id=2300270 bin=GWA2_Elusimicrobia_69_24 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
peptidase, m20 family
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_2396028_10
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

7482..8819
DNA (1338bp) protein (446aa)
argH; argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase id=2300269 bin=GWA2_Elusimicrobia_69_24 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_2396028_11
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

8901..11549
DNA (2649bp) protein (883aa)
Tax=RBG_16_Elusimicrobia_66_12_curated
SR-2_scaffold_141_2396028_12
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(11546..13618)
DNA (2073bp) protein (691aa)
tkt; transketolase (EC:2.2.1.1)
Transketolase id=1881270 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Tax=GWC2_Nitrospirae_57_13_curated
SR-2_scaffold_141_2396028_13
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(13615..17001)
DNA (3387bp) protein (1129aa)
Tetratricopeptide TPR_1 repeat-containing protein id=2909512 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
SR-2_scaffold_141_2396028_14
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

17181..17720
DNA (540bp) protein (180aa)
cyaC; adenylate cyclase transmembrane protein (EC:4.6.1.1)
hypothetical protein id=1267051 bin=GWE1_Spirochaete_60_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_Spirochaete_60_18 organism_group=Spirochaetes
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
SR-2_scaffold_141_2396028_15
RifOxyA12_full_Elusimicrobia_57_11_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17734..18417)
DNA (684bp) protein (228aa)
Uncharacterized protein id=3804832 bin=GWA2_Elusimicrobia_66_18 species=Gloeocapsa sp. PCC 7428 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
glycosyl transferase family 2
Tax=RifOxyA12_full_Elusimicrobia_57_11_curated
SR-2_scaffold_141_2396028_16
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18424..19629)
DNA (1206bp) protein (402aa)
DegT/DnrJ/EryC1/StrS aminotransferase id=3804692 bin=GWA2_Elusimicrobia_66_18 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
perosamine synthetase
Tax=GWC2_Elusimicrobia_65_9_curated
SR-2_scaffold_141_2396028_17
unknown

Not on your lists

19731..21833
DNA (2103bp) protein (701aa)

This feature has no annotations

SR-2_scaffold_141_2396028_18
unknown

Not on your lists

21839..23452
DNA (1614bp) protein (538aa)

This feature has no annotations

SR-2_scaffold_141_2396028_19
Firmicutes bacterium CAG:631, Firmicutes, Bacteria

Not on your lists

comp(23449..23694)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:631 RepID=R5VQ31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ85636.1}; TaxID=1262996 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:631.;"
hypothetical protein
SR-2_scaffold_141_2396028_20
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23708..24529)
DNA (822bp) protein (274aa)
Tetratricopeptide TPR_2 n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FNJ8_METHJ
tetratricopeptide TPR_2
Tetratricopeptide TPR_2 {ECO:0000313|EMBL:ABD41183.1}; TaxID=323259 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospirillum.;" source="Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC; 100397 / JF-1).;"
SR-2_scaffold_141_2396028_21
unknown

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comp(24557..24820)
DNA (264bp) protein (88aa)

This feature has no annotations

SR-2_scaffold_141_2396028_22
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(24837..25961)
DNA (1125bp) protein (375aa)
Radical SAM domain protein id=4324704 bin=GWA2_Ignavibacteria_55_11 species=Yersinia bercovieri genus=Yersinia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Radical SAM domain protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
SR-2_scaffold_141_2396028_23
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(25965..26810)
DNA (846bp) protein (282aa)
id=4174295 bin=GWC2_Ignavibacteria_56_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
SR-2_scaffold_141_2396028_24
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(26807..27784)
DNA (978bp) protein (326aa)
GI11448 id=3135213 bin=GWC2_Nitrospirae_57_13 species=Drosophila grimshawi genus=Drosophila taxon_order=Diptera taxon_class=Insecta phylum=Arthropoda tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=GWC2_Nitrospirae_57_13_curated
SR-2_scaffold_141_2396028_25
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

27973..29568
DNA (1596bp) protein (532aa)
Peptide chain release factor 3 id=2859941 bin=GWC2_Elusimicrobia_51_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
peptide chain release factor 3
Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
SR-2_scaffold_141_2396028_26
R_SM2F11_50_11, SM2F11, Bacteria

Not on your lists

comp(29616..30020)
DNA (405bp) protein (135aa)
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_50_11_curated
SR-2_scaffold_141_2396028_27
unknown

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comp(30017..30580)
DNA (564bp) protein (188aa)
SR-2_scaffold_141_2396028_28
unknown

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comp(30577..30948)
DNA (372bp) protein (124aa)
SR-2_scaffold_141_2396028_29
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists

comp(30959..32014)
DNA (1056bp) protein (352aa)
Type IV pilus assembly protein PilC id=3525734 bin=GWA2_Elusimicrobia_66_18 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
type IV pilus assembly protein PilC
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
SR-2_scaffold_141_2396028_30
GWA1_OP11_48_10_plus, Microgenomates, Bacteria

Not on your lists

comp(32021..33145)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI00037B0A15
Uncharacterized protein {ECO:0000313|EMBL:KKU91888.1}; TaxID=1618496 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA1_48_10.;"
type II secretion system F domain-containing protein
Displaying items 1-30 of 89 in total

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