ggKbase home page

SR-2_scaffold_141_2716486

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-2_scaffold_141_2716486_1
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(177..692)
DNA (516bp) protein (172aa)
lepB; signal peptidase I (EC:3.4.21.89)
Signal peptidase I id=4018644 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_2716486_2
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

787..2055
DNA (1269bp) protein (423aa)
Uncharacterized conserved protein id=2319589 bin=GWA2_Elusimicrobia_66_18 species=uncultured bacterium URE12 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
Tax=RBG_16_Elusimicrobia_66_12_curated
SR-2_scaffold_141_2716486_3
RIFOXYA2_FULL_Elusimicrobia_69_6_curated, Elusimicrobia, Bacteria

Not on your lists

2128..2568
DNA (441bp) protein (147aa)
Putative uncharacterized protein id=4232933 bin=GWC2_Elusimicrobia_64_44 species=Denitrovibrio acetiphilus genus=Denitrovibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
Tax=RIFOXYA2_FULL_Elusimicrobia_69_6_curated
SR-2_scaffold_141_2716486_4
RIFOXYA2_FULL_Elusimicrobia_69_6_curated, Elusimicrobia, Bacteria

Not on your lists

2640..3929
DNA (1290bp) protein (430aa)
PREDICTED: cyclin-dependent kinase inhibitor 1C, partial n=1 Tax=Chinchilla lanigera RepID=UPI00038EEE07
Tax=RIFOXYA2_FULL_Elusimicrobia_69_6_curated
SR-2_scaffold_141_2716486_5
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3942..5453)
DNA (1512bp) protein (504aa)
SSS sodium solute transporter superfamily id=2319591 bin=GWA2_Elusimicrobia_66_18 species=Coraliomargarita akajimensis genus=Coraliomargarita taxon_order=Puniceicoccales taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
sodium solute transporter superfamily protein
Tax=GWC2_Elusimicrobia_65_9_curated
SR-2_scaffold_141_2716486_6
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(5478..7022)
DNA (1545bp) protein (515aa)
Putative carbohydrate-active enzyme id=2319592 bin=GWA2_Elusimicrobia_66_18 species=uncultured organism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
glycoside hydrolase family protein
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_2716486_7
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

7075..9372
DNA (2298bp) protein (766aa)
Predicted protein id=2319593 bin=GWA2_Elusimicrobia_66_18 species=Monosiga brevicollis genus=Monosiga taxon_order=Choanoflagellida taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
filamentous hemagglutinin family outer membrane protein
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_2716486_8
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

9369..9944
DNA (576bp) protein (192aa)
hypothetical protein id=2319594 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RBG_16_Elusimicrobia_66_12_curated
SR-2_scaffold_141_2716486_9
RHI_TM6_32_22, TM6, Bacteria

Not on your lists

9950..10357
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UI76_MYXSD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_TM6_32_22_curated
SR-2_scaffold_141_2716486_10
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

10479..12476
DNA (1998bp) protein (666aa)
penicillin-binding protein (EC:2.4.1.129)
Multimodular transpeptidase-transglycosylase id=5019327 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_2716486_11
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

12556..15294
DNA (2739bp) protein (913aa)
Uncharacterized conserved protein id=5019264 bin=GWA2_Elusimicrobia_69_24 species=uncultured nuHF2 cluster bacterium HF0500_31B05 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Sel1 domain-containing protein repeat-containing protein
Tax=CG_Elusi_04
SR-2_scaffold_141_2716486_12
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

15356..16903
DNA (1548bp) protein (516aa)
Peptidase S8 and S53 subtilisin kexin sedolisin id=3354646 bin=GWA2_Elusimicrobia_66_18 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RBG_16_Elusimicrobia_66_12_curated
SR-2_scaffold_141_2716486_13
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

16900..17376
DNA (477bp) protein (159aa)
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex id=5019325 bin=GWA2_Elusimicrobia_69_24 species=Cryptococcus neoformans genus=Filobasidiella taxon_order=Tremellales taxon_class=Tremellomycetes phylum=Basidiomycota tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_2716486_14
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

17412..18638
DNA (1227bp) protein (409aa)
DEAD/DEAH box helicase domain protein id=1843716 bin=GWA2_Elusimicrobia_66_18 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
DEAD/DEAH box helicase domain protein
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_2716486_15
RIFOXYA2_FULL_Elusimicrobia_69_6_curated, Elusimicrobia, Bacteria

Not on your lists

18720..19271
DNA (552bp) protein (184aa)
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog id=4270880 bin=GWA2_Elusimicrobia_69_24 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
RpoE; DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein
Tax=RIFOXYA2_FULL_Elusimicrobia_69_6_curated
SR-2_scaffold_141_2716486_16
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

19264..21420
DNA (2157bp) protein (719aa)
von Willebrand factor type A id=2458792 bin=GWA2_Elusimicrobia_69_24 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_2716486_17
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

21531..22931
DNA (1401bp) protein (467aa)
Lytic transglycosylase, catalytic id=5019892 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Slt family transglycosylase
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_2716486_18
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22932..24200)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P971_AROAE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI06138.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
SR-2_scaffold_141_2716486_19
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24197..25720)
DNA (1524bp) protein (508aa)
membrane protein n=1 Tax=Pseudomonas sp. R81 RepID=UPI00029AF937
hypothetical protein
Membrane protein {ECO:0000313|EMBL:ERH59740.1}; TaxID=1390371 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens EGD-AQ6.;"
SR-2_scaffold_141_2716486_20
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(25894..26610)
DNA (717bp) protein (239aa)
hypothetical protein id=3841833 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_2716486_21
unknown

Not on your lists

comp(26692..26955)
DNA (264bp) protein (88aa)

This feature has no annotations

SR-2_scaffold_141_2716486_22
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27325..29313
DNA (1989bp) protein (663aa)
(Myosin heavy-chain) kinase., Histone acetyltransferase {ECO:0000313|EMBL:AEE50144.1}; EC=2.3.1.48 {ECO:0000313|EMBL:AEE50144.1};; EC=2.7.11.7 {ECO:0000313|EMBL:AEE50144.1};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
(Myosin heavy-chain) kinase., Histone acetyltransferase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KU47_HALH1
(myosin heavy-chain) kinase
SR-2_scaffold_141_2716486_23
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(29441..30313)
DNA (873bp) protein (291aa)
RND family efflux transporter MFP subunit id=14426436 bin=bin1_lowGC species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
secretion protein HlyD family protein
Tax=CSP1_2_Dadabacteria
SR-2_scaffold_141_2716486_24
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(30330..31013)
DNA (684bp) protein (228aa)
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein id=14426437 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
ABC transporter
Tax=CSP1_2_Dadabacteria
SR-2_scaffold_141_2716486_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(31010..32194)
DNA (1185bp) protein (395aa)
ABC efflux pump, inner membrane subunit id=4362540 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter permease
Tax=GWA2_Rokubacteria_70_23_curated
SR-2_scaffold_141_2716486_26
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(32191..32808)
DNA (618bp) protein (206aa)
Transcriptional regulator, TetR family n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVS0_9BACT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:BAL59703.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
TetR family transcriptional regulator
SR-2_scaffold_141_2716486_27
unknown

Not on your lists

comp(32924..33451)
DNA (528bp) protein (176aa)

This feature has no annotations

SR-2_scaffold_141_2716486_28
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

33515..34333
DNA (819bp) protein (273aa)
hypothetical protein id=3972517 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_69_24_curated
SR-2_scaffold_141_2716486_29
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(34334..34645)
DNA (312bp) protein (104aa)
hypothetical protein id=4561113 bin=GWA2_Elusi_like_61_42 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
SR-2_scaffold_141_2716486_30
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34731..35528
DNA (798bp) protein (266aa)
FKBP-type Peptidyl-prolyl cis-trans isomerase 1 (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q097V5_STIAD
Displaying items 1-30 of 49 in total

View Taxonomy