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FFV18_Bp1_scaffold_457595

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
FFV18_Bp1_scaffold_457595_1
CG_Elusi_02, Elusimicrobia, Bacteria

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comp(151..759)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B63CF9
Tax=CG_Elusi_02
FFV18_Bp1_scaffold_457595_2
Synechococcus sp. JA-2-3B'a(2-13), Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(888..1103)
DNA (216bp) protein (72aa)
Gas vesicle structural protein n=2 Tax=Synechococcus RepID=GVPA_SYNJA
Gas vesicle structural protein {ECO:0000255|HAMAP-Rule:MF_00576}; Short=GVP {ECO:0000255|HAMAP-Rule:MF_00576};; TaxID=321332 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium; Yellowstone B-Prime).;"
FFV18_Bp1_scaffold_457595_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1687..3135)
DNA (1449bp) protein (483aa)
Two component, sigma-54 specific, transcriptional regulator, Fis family n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5E5_GEOUR
Two component, sigma-54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABQ27013.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
FFV18_Bp1_scaffold_457595_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3113..4198)
DNA (1086bp) protein (362aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5E6_GEOUR
FFV18_Bp1_scaffold_457595_5
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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comp(4591..6729)
DNA (2139bp) protein (713aa)
AAA family ATPase, CDC48 subfamily n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I4U3_DESAP
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
FFV18_Bp1_scaffold_457595_6
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

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comp(6713..7333)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EG20_9BACT
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
FFV18_Bp1_scaffold_457595_7
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7303..7716)
DNA (414bp) protein (138aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D4I1_DESAJ
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
FFV18_Bp1_scaffold_457595_8
unknown

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comp(7673..8296)
DNA (624bp) protein (208aa)

This feature has no annotations

FFV18_Bp1_scaffold_457595_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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9433..10605
DNA (1173bp) protein (391aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFD4_9BACT
FFV18_Bp1_scaffold_457595_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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10672..12027
DNA (1356bp) protein (452aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] id=12556749 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
FFV18_Bp1_scaffold_457595_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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12115..13173
DNA (1059bp) protein (353aa)
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4) id=14425495 bin=bin1_lowGC species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
FFV18_Bp1_scaffold_457595_12
unknown

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comp(13733..14668)
DNA (936bp) protein (312aa)

This feature has no annotations

FFV18_Bp1_scaffold_457595_13
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists


comp(14861..17314)
DNA (2454bp) protein (818aa)
DNA gyrase subunit A id=3437535 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
FFV18_Bp1_scaffold_457595_14
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17435..19882)
DNA (2448bp) protein (816aa)
DNA gyrase subunit B id=1991907 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Tax=CG_Desulfob_01
FFV18_Bp1_scaffold_457595_15
GWD2_OD1_38_7, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(20167..20658)
DNA (492bp) protein (164aa)
S23 ribosomal protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CN49_SIDLE
S23 ribosomal protein {ECO:0000313|EMBL:KKQ79550.1}; TaxID=1618706 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWD2_38_7.;"
Displaying 15 items

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