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Montesol18-Sp2_coassembly_scaffold_114245

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_114245_1
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..355
-----------------
DNA (354bp)
protein (118aa)
Tyrosine recombinase XerC n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SCZ0_PHAFV
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.;"
xerC; site-specific tyrosine recombinase (integrase/recombinase)
Montesol18-Sp2_coassembly_scaffold_114245_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(352..1557)
-----------------
DNA (1206bp)
protein (402aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI000366888B
major facilitator superfamily permease
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Montesol18-Sp2_coassembly_scaffold_114245_3
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1670..2299
-----------------
DNA (630bp)
protein (210aa)
Exopolysaccharide synthesis, ExoD n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3THV4_TISMK
exoD; exopolysaccharide synthesis, ExoD
Exopolysaccharide synthesis, ExoD {ECO:0000313|EMBL:AFK52342.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
Montesol18-Sp2_coassembly_scaffold_114245_4
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2315..3724)
-----------------
DNA (1410bp)
protein (470aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
Dihydrolipoyl dehydrogenase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A3P3_9PROT
lpdA; dihydrolipoyl dehydrogenase
Montesol18-Sp2_coassembly_scaffold_114245_5
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3841..4746
-----------------
DNA (906bp)
protein (302aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037F1528
Bradyrhizobium elkanii strain UASWS1015 Contig180, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47209.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
citrate lyase subunit beta
Montesol18-Sp2_coassembly_scaffold_114245_6
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4766..5980)
-----------------
DNA (1215bp)
protein (405aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
2-oxoglutarate dehydrogenase complex,Dihydrolipoamide succinyltransferase component (E2) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AHT7_AZOBR
dihydrolipoamide succinyltransferase
Montesol18-Sp2_coassembly_scaffold_114245_7
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6013..8880)
-----------------
DNA (2868bp)
protein (956aa)
MFS transporter {ECO:0000313|EMBL:KJB94874.1}; EC=1.2.4.2 {ECO:0000313|EMBL:KJB94874.1};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase, E1 component n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IPE9_RHOCS
Montesol18-Sp2_coassembly_scaffold_114245_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8990..9865)
-----------------
DNA (876bp)
protein (292aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Oceanibaculum indicum P24 RepID=K2JS91_9PROT
Montesol18-Sp2_coassembly_scaffold_114245_9
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9867..11063)
-----------------
DNA (1197bp)
protein (399aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Oceanibaculum indicum P24 RepID=K2K639_9PROT
Montesol18-Sp2_coassembly_scaffold_114245_10
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11225..12193)
-----------------
DNA (969bp)
protein (323aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
malate dehydrogenase, NAD-dependent (EC:1.1.1.37)
Malate dehydrogenase n=1 Tax=Oceanibaculum indicum P24 RepID=K2KLN0_9PROT
Montesol18-Sp2_coassembly_scaffold_114245_11
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12281..13435)
-----------------
DNA (1155bp)
protein (385aa)
ATPase, AFG1 family n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IYD5_RHOCS
ATPase
ATPase, AFG1 family {ECO:0000313|EMBL:ACJ01309.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Montesol18-Sp2_coassembly_scaffold_114245_12
bacterium YEK0313, Bacteria

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comp(13502..14479)
-----------------
DNA (978bp)
protein (326aa)
2-nitropropane dioxygenase NPD n=1 Tax=Oceanibaculum indicum P24 RepID=K2K5T3_9PROT
Nitronate monooxygenase {ECO:0000313|EMBL:CEJ09924.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_114245_13
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14492..15487)
-----------------
DNA (996bp)
protein (332aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKW3_METPP
hypothetical protein
Tax=RBG_16_Gamma2_60_9_curated
Montesol18-Sp2_coassembly_scaffold_114245_14
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(15481..15726)
-----------------
DNA (246bp)
protein (82aa)
SAF domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEZ6_ANADF
SAF domain-containing protein
SAF domain protein {ECO:0000313|EMBL:ABS27292.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
Montesol18-Sp2_coassembly_scaffold_114245_15
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15732..16538)
-----------------
DNA (807bp)
protein (269aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K6W1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE78564.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_114245_16
unknown

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16754..17137
-----------------
DNA (384bp)
protein (128aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_114245_17
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17173..17379
-----------------
DNA (207bp)
protein (69aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QI08_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGP09211.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
Montesol18-Sp2_coassembly_scaffold_114245_18
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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comp(17391..18077)
-----------------
DNA (687bp)
protein (229aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037FBE39
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Montesol18-Sp2_coassembly_scaffold_114245_19
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18138..18914)
-----------------
DNA (777bp)
protein (259aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
succinate dehydrogenase iron-sulfur subunit n=1 Tax=Elioraea tepidiphila RepID=UPI0003697BAD
succinate dehydrogenase iron-sulfur protein
Montesol18-Sp2_coassembly_scaffold_114245_20

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comp(18979..20727)
-----------------
DNA (1749bp)
protein (583aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase, flavoprotein subunit n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IYA9_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:KKN89069.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Montesol18-Sp2_coassembly_scaffold_114245_21
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20754..21146)
-----------------
DNA (393bp)
protein (131aa)
Succinate dehydrogenase, hydrophobic membrane anchor protein, putative n=1 Tax=alpha proteobacterium BAL199 RepID=A8TXJ4_9PROT
Succinate dehydrogenase, hydrophobic membrane anchor protein, putative {ECO:0000313|EMBL:EDP62792.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
succinate dehydrogenase
Montesol18-Sp2_coassembly_scaffold_114245_22
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21143..21574)
-----------------
DNA (432bp)
protein (144aa)
Succinate dehydrogenase, cytochrome b subunit n=1 Tax=alpha proteobacterium BAL199 RepID=A8TXJ5_9PROT
Succinate dehydrogenase, cytochrome b subunit {ECO:0000313|EMBL:EDP62793.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
sdhC; succinate dehydrogenase cytochrome b-556 subunit
Montesol18-Sp2_coassembly_scaffold_114245_23
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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21951..22874
-----------------
DNA (924bp)
protein (308aa)
Uncharacterized protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AQI7_PELPD
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
Displaying 23 items

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