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Montesol18-Sp2_coassembly_scaffold_411901

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_411901_1
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..891)
-----------------
DNA (891bp)
protein (297aa)
Protein translocase subunit SecY n=1 Tax=Oceanibaculum indicum P24 RepID=K2JT48_9PROT
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
preprotein translocase subunit SecY
Montesol18-Sp2_coassembly_scaffold_411901_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(928..1554)
-----------------
DNA (627bp)
protein (209aa)
50S ribosomal protein L15 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAC5_9BRAD
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
50S ribosomal protein L15
Montesol18-Sp2_coassembly_scaffold_411901_3
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1600..1806)
-----------------
DNA (207bp)
protein (69aa)
50S ribosomal protein L30 n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AEG3_9PROT
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
rpmD; Ribosomal protein L30
Montesol18-Sp2_coassembly_scaffold_411901_4
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1820..2407)
-----------------
DNA (588bp)
protein (196aa)
30S ribosomal protein S5 n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4F8_9PROT
rpsE; 30S ribosomal subunit protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
Montesol18-Sp2_coassembly_scaffold_411901_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2441..2803)
-----------------
DNA (363bp)
protein (121aa)
50S ribosomal protein L18 n=1 Tax=Novispirillum itersonii RepID=UPI000360A735
rplR; 50S ribosomal protein L18
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Montesol18-Sp2_coassembly_scaffold_411901_6
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2813..3349)
-----------------
DNA (537bp)
protein (179aa)
50S ribosomal protein L6 n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NS55_AZOS1
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Montesol18-Sp2_coassembly_scaffold_411901_7
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3359..3757)
-----------------
DNA (399bp)
protein (133aa)
30S ribosomal protein S8 n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LN93_9PROT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
rpsH; 30S ribosomal protein S8
Montesol18-Sp2_coassembly_scaffold_411901_8
Hyphomonas beringensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3773..4078)
-----------------
DNA (306bp)
protein (102aa)
30S ribosomal protein S14 n=1 Tax=Oceanibaculum indicum P24 RepID=K2JG76_9PROT
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1280946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas beringensis.;"
30S ribosomal protein S14
Montesol18-Sp2_coassembly_scaffold_411901_9
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4111..4656)
-----------------
DNA (546bp)
protein (182aa)
50S ribosomal protein L5 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRR8_RHOCS
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Montesol18-Sp2_coassembly_scaffold_411901_10
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4656..4991)
-----------------
DNA (336bp)
protein (112aa)
50S ribosomal protein L24 n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3HZT5_RHOVT
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
Montesol18-Sp2_coassembly_scaffold_411901_11
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4992..5360)
-----------------
DNA (369bp)
protein (123aa)
50S ribosomal protein L14 n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZK3_9PROT
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
rplN; 50S ribosomal protein L14
Montesol18-Sp2_coassembly_scaffold_411901_12
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5394..5651)
-----------------
DNA (258bp)
protein (86aa)
30S ribosomal protein S17 n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GTG7_9PROT
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
rpsQ; 30S ribosomal protein S17
Montesol18-Sp2_coassembly_scaffold_411901_13
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5669..5881)
-----------------
DNA (213bp)
protein (71aa)
50S ribosomal protein L29 n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZI92_9PROT
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
50S ribosomal protein L29
Montesol18-Sp2_coassembly_scaffold_411901_14
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5893..6306)
-----------------
DNA (414bp)
protein (138aa)
50S ribosomal protein L16 n=1 Tax=Oceanibaculum indicum P24 RepID=K2ITH5_9PROT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
50S ribosomal protein L16
Montesol18-Sp2_coassembly_scaffold_411901_15
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6337..7014)
-----------------
DNA (678bp)
protein (226aa)
30S ribosomal protein S3 n=2 Tax=Magnetospirillum gryphiswaldense RepID=A4U4E7_9PROT
rpsC; 30S ribosomal subunit protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Montesol18-Sp2_coassembly_scaffold_411901_16
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7016..7411)
-----------------
DNA (396bp)
protein (132aa)
50S ribosomal protein L22 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=RL22_RHOCS
rplV; 50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000255|HAMAP-Rule:MF_01331}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Montesol18-Sp2_coassembly_scaffold_411901_17
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7408..7695)
-----------------
DNA (288bp)
protein (96aa)
30S ribosomal protein S19 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AEL1_AZOBR
rpsS; 30S ribosomal subunit protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Montesol18-Sp2_coassembly_scaffold_411901_18
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7708..8535)
-----------------
DNA (828bp)
protein (276aa)
50S ribosomal protein L2 n=2 Tax=Phaeospirillum RepID=H8FN05_PHAMO
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
rplB; 50S ribosomal protein L2
Montesol18-Sp2_coassembly_scaffold_411901_19
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8556..8915)
-----------------
DNA (360bp)
protein (120aa)
50S ribosomal protein L23 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRQ8_RHOCS
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Montesol18-Sp2_coassembly_scaffold_411901_20
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8912..9532)
-----------------
DNA (621bp)
protein (207aa)
50S ribosomal protein L4 n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HFU0_9PROT
50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Montesol18-Sp2_coassembly_scaffold_411901_21
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(9538..10230)
-----------------
DNA (693bp)
protein (231aa)
50S ribosomal protein L3 n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZUA5_9PROT
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
rplC; 50S ribosomal protein L3
Montesol18-Sp2_coassembly_scaffold_411901_22
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10275..10589)
-----------------
DNA (315bp)
protein (105aa)
30S ribosomal protein S10 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AEL6_AZOBR
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Montesol18-Sp2_coassembly_scaffold_411901_23
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10624..10815)
-----------------
DNA (192bp)
protein (64aa)
Elongation factor Tu n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GMP4_9PROT
elongation factor Tu
Elongation factor Tu {ECO:0000256|RuleBase:RU004061}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
Displaying 23 items

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