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Montesol18-Sp2_coassembly_scaffold_435439

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_435439_1
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(117..539)
-----------------
DNA (423bp)
protein (141aa)
Putative Peroxide-responsive repressor (PerR-like), fur family n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AFG1_AZOBR
Fur family transcriptional regulator
Fur family transcriptional regulator {ECO:0000313|EMBL:AIB13172.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Montesol18-Sp2_coassembly_scaffold_435439_2
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(644..1993)
-----------------
DNA (1350bp)
protein (450aa)
Putative 2-nitropropane dioxygenase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z263_AZOL4
2-nitropropane dioxygenase {ECO:0000313|EMBL:KJV08756.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
2-nitropropane dioxygenase
Montesol18-Sp2_coassembly_scaffold_435439_3
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2286..3035)
-----------------
DNA (750bp)
protein (250aa)
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CCC96513.1}; EC=3.1.4.46 {ECO:0000313|EMBL:CCC96513.1};; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AFG4_AZOBR
ugpQ; glycerophosphoryl diester phosphodiesterase
Montesol18-Sp2_coassembly_scaffold_435439_4
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3124..5253)
-----------------
DNA (2130bp)
protein (710aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
Polyribonucleotide nucleotidyltransferase n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FU68_PHAMO
polynucleotide phosphorylase/polyadenylase
Montesol18-Sp2_coassembly_scaffold_435439_5
unknown

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5400..5567
-----------------
DNA (168bp)
protein (56aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_435439_6
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5621..5890)
-----------------
DNA (270bp)
protein (90aa)
30S ribosomal protein S15 n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LWE0_9PROT
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
30S ribosomal protein S15
Montesol18-Sp2_coassembly_scaffold_435439_7
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5925..6890)
-----------------
DNA (966bp)
protein (322aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
tRNA pseudouridine synthase B n=1 Tax=Oceanibaculum indicum P24 RepID=K2JUY0_9PROT
pseudouridine synthase
Montesol18-Sp2_coassembly_scaffold_435439_8
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6877..7308)
-----------------
DNA (432bp)
protein (144aa)
Ribosome-binding factor A n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U0B0_9PROT
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
rbfA; Ribosome-binding factor A
Montesol18-Sp2_coassembly_scaffold_435439_9
GWF2_Alphaproteobacteria_58_20_curated, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7380..8129)
-----------------
DNA (750bp)
protein (250aa)
flagellar biosynthesis protein FliP n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B5DF81
fliP; flagellar biosynthetic protein FliP
Tax=GWF2_Alphaproteobacteria_58_20_curated
Montesol18-Sp2_coassembly_scaffold_435439_10
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8126..8470)
-----------------
DNA (345bp)
protein (115aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI00026308C5
Uncharacterized protein {ECO:0000313|EMBL:KJB90931.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_435439_11
unknown

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comp(8476..8730)
-----------------
DNA (255bp)
protein (85aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_435439_12
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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9156..9587
-----------------
DNA (432bp)
protein (144aa)
Flagellar basal-body rod protein FlgB n=1 Tax=Azospirillum amazonense Y2 RepID=G1XXL8_9PROT
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
flgB1; flagellar basal-body rod protein FlgB
Montesol18-Sp2_coassembly_scaffold_435439_13
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9609..10019
-----------------
DNA (411bp)
protein (137aa)
Flagellar basal-body rod protein FlgC (Cell-proximal rod protein) n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FMS1_PHAMO
flgC; flagellar basal body rod protein FlgC
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
Montesol18-Sp2_coassembly_scaffold_435439_14
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10077..10385
-----------------
DNA (309bp)
protein (103aa)
Flagellar hook-basal body complex protein FliE n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ANF0_AZOBR
fliE; flagellar hook-basal body protein FliE
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
Montesol18-Sp2_coassembly_scaffold_435439_15
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10399..10665
-----------------
DNA (267bp)
protein (89aa)
flagellar biosynthesis protein FliQ n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B634BA
Flagellar biosynthesis protein FliQ {ECO:0000313|EMBL:EWY37142.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
flagellar biosynthetic protein FliQ
Montesol18-Sp2_coassembly_scaffold_435439_16
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

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10679..11443
-----------------
DNA (765bp)
protein (255aa)
Flagellar biosynthetic protein fliR n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SE19_PHAFV
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
flagellar biosynthetic protein FliR
Montesol18-Sp2_coassembly_scaffold_435439_17
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11447..12529
-----------------
DNA (1083bp)
protein (361aa)
flagellar biosynthesis protein FlhB n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B47E5E
flagellar biosynthetic protein FlhB
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
Montesol18-Sp2_coassembly_scaffold_435439_18
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12594..15095
-----------------
DNA (2502bp)
protein (834aa)
Putative sensor histidine kinase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ANE6_AZOBR
Histidine kinase {ECO:0000313|EMBL:EWY37139.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
histidine kinase
Montesol18-Sp2_coassembly_scaffold_435439_19
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15144..17735)
-----------------
DNA (2592bp)
protein (864aa)
Translation initiation factor IF-2 n=1 Tax=Oceanibaculum indicum P24 RepID=K2K650_9PROT
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
infB; translation initiation factor IF-2
Montesol18-Sp2_coassembly_scaffold_435439_20
GWF1_Rhodobacteraceae_65_7_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17751..18188)
-----------------
DNA (438bp)
protein (146aa)
Putative uncharacterized protein id=2535773 bin=GWF1_Rhodobacteraceae_65_7 species=Rhodobacter sp. SW2 genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWF1_Rhodobacteraceae_65_7_curated
Displaying 20 items

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