ggKbase home page

Montesol18-Sp2_coassembly_scaffold_446576

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_446576_1
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..692)
-----------------
DNA (690bp)
protein (230aa)
Aminoglycoside phosphotransferase, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRA2_RHOCS
fadE36; aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase, putative {ECO:0000313|EMBL:ACI97988.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Montesol18-Sp2_coassembly_scaffold_446576_2
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

899..2536
-----------------
DNA (1638bp)
protein (546aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligase II n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TI90_TISMK
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:EWY39408.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
alkK; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligase II
Montesol18-Sp2_coassembly_scaffold_446576_3
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

2600..3781
-----------------
DNA (1182bp)
protein (394aa)
Probable thiolase id=2937759 bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acetyl-CoA acetyltransferase
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Montesol18-Sp2_coassembly_scaffold_446576_4
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3789..4652)
-----------------
DNA (864bp)
protein (288aa)
3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase (EC:4.2.1.107)
MaoC-like dehydratase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZ06_9PROT
MaoC-like dehydratase {ECO:0000313|EMBL:EDP62567.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
Montesol18-Sp2_coassembly_scaffold_446576_5
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4853..6517
-----------------
DNA (1665bp)
protein (555aa)
Histidine kinase,histidine kinase,MASE1-containing protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKH8_AZOSU
histidine kinase,histidine kinase,MASE1-containing protein
Tax=CG_Beta_01
Montesol18-Sp2_coassembly_scaffold_446576_6
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6507..7124
-----------------
DNA (618bp)
protein (206aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035C54AB
LuxR family two component transcriptional regulator
Tax=RBG_16_Gamma2_65_34_curated
Montesol18-Sp2_coassembly_scaffold_446576_7
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7223..8047
-----------------
DNA (825bp)
protein (275aa)
Universal stress protein UspA-like nucleotide-binding protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NUQ6_AZOS1
Universal stress protein UspA {ECO:0000313|EMBL:KJB92776.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
universal stress protein UspA
Montesol18-Sp2_coassembly_scaffold_446576_8
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8254..9990)
-----------------
DNA (1737bp)
protein (579aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMJ8_RHOCS
Montesol18-Sp2_coassembly_scaffold_446576_trna_1
unknown

Not on your lists

comp(10146..10228)
-----------------
DNA (83bp)
transferRNA Leu
Montesol18-Sp2_coassembly_scaffold_446576_9
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10380..10961
-----------------
DNA (582bp)
protein (194aa)
Conserved hypothetical membrane protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISJ8_RHOCS
Cytochrome B561 {ECO:0000313|EMBL:EWY39619.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
conserved membrane protein of unknown function
Montesol18-Sp2_coassembly_scaffold_446576_10
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10986..11495
-----------------
DNA (510bp)
protein (170aa)
Disulphide bond formation protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AFX5_AZOBR
Disulfide bond formation protein {ECO:0000313|EMBL:EWY39618.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
dsbB; disulphide bond formation protein
Montesol18-Sp2_coassembly_scaffold_446576_11
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11500..12057
-----------------
DNA (558bp)
protein (186aa)
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658}; EC=1.14.13.- {ECO:0000256|HAMAP-Rule:MF_01658};; 5-demethoxyubiquinone hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
ubiquinone biosynthesis protein UbiB n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B7946E
putative Ubiquinone biosynthesis protein COQ7 homolog
Montesol18-Sp2_coassembly_scaffold_446576_12
unknown

Not on your lists

12219..12398
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_446576_13
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12418..12981)
-----------------
DNA (564bp)
protein (188aa)
Putative HNH endonuclease n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AFX2_AZOBR
putative HNH endonuclease
Putative HNH endonuclease {ECO:0000313|EMBL:CCC99127.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
Montesol18-Sp2_coassembly_scaffold_446576_14
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13106..13768)
-----------------
DNA (663bp)
protein (221aa)
Predicted esterase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TIW1_9PROT
Predicted esterase {ECO:0000313|EMBL:EDP66587.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
phospholipase/carboxylesterase
Montesol18-Sp2_coassembly_scaffold_446576_15
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13871..14755
-----------------
DNA (885bp)
protein (295aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamyl-tRNA synthetase GltX {ECO:0000313|EMBL:ACJ01454.1}; EC=6.1.1.17 {ECO:0000313|EMBL:ACJ01454.1};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Glutamyl-tRNA synthetase GltX n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IYT0_RHOCS
Montesol18-Sp2_coassembly_scaffold_446576_16
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15447..15797
-----------------
DNA (351bp)
protein (117aa)
Uncharacterized protein {ECO:0000313|EMBL:KDB03176.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;"
Montesol18-Sp2_coassembly_scaffold_446576_17
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15809..16621)
-----------------
DNA (813bp)
protein (271aa)
Adenine specific DNA methyltransferase, D12 class (EC:2.1.1.72)
DNA methyltransferase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225FBCE
D12 class N6 adenine-specific DNA methyltransferase {ECO:0000313|EMBL:GAK43585.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
Montesol18-Sp2_coassembly_scaffold_446576_18

Not on your lists

16870..17349
-----------------
DNA (480bp)
protein (160aa)
Marine sediment metagenome DNA, contig: S01H1_L06626 {ECO:0000313|EMBL:GAF78947.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Montesol18-Sp2_coassembly_scaffold_446576_19

Not on your lists

comp(17388..17969)
-----------------
DNA (582bp)
protein (194aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7F1M9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKL66189.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Montesol18-Sp2_coassembly_scaffold_446576_20

Not on your lists

comp(17971..19368)
-----------------
DNA (1398bp)
protein (466aa)
Uncharacterized protein n=2 Tax=Desulfovibrio vulgaris RepID=E3ISX5_DESVR
Uncharacterized protein {ECO:0000313|EMBL:KKN90079.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_446576_21
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19373..23110)
-----------------
DNA (3738bp)
protein (1246aa)
Tail fiber protein n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CGT7_9RHOB
phage-related protein, tail component
Phage-related protein, tail component {ECO:0000313|EMBL:BAQ18295.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
Montesol18-Sp2_coassembly_scaffold_446576_22
unknown

Not on your lists

23149..23550
-----------------
DNA (402bp)
protein (134aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_446576_23
unknown

Not on your lists

comp(23526..23669)
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

Displaying 24 items

View Taxonomy