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Montesol18-Sp2_coassembly_scaffold_455731

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_455731_1
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..626
-----------------
DNA (624bp)
protein (208aa)
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NRP3_AZOS1
Montesol18-Sp2_coassembly_scaffold_455731_2
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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632..1510
-----------------
DNA (879bp)
protein (293aa)
Prephenate dehydratase {ECO:0000313|EMBL:EWY39201.1}; EC=4.2.1.51 {ECO:0000313|EMBL:EWY39201.1};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
pheA; Prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6L5_9PROT
Montesol18-Sp2_coassembly_scaffold_455731_3
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1523..2023
-----------------
DNA (501bp)
protein (167aa)
Aminoacyl-tRNA editing enzymes YbaK, ProX n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RCQ6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KIL99142.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_455731_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2027..2407)
-----------------
DNA (381bp)
protein (127aa)
UPI0003CFFD09 related cluster n=1 Tax=unknown RepID=UPI0003CFFD09
cytochrome C
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Montesol18-Sp2_coassembly_scaffold_455731_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2494..3090)
-----------------
DNA (597bp)
protein (199aa)
ferritin n=1 Tax=Curvibacter lanceolatus RepID=UPI000364DE99
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Montesol18-Sp2_coassembly_scaffold_455731_6
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3251..3985)
-----------------
DNA (735bp)
protein (245aa)
Uncharacterized protein-like protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZAJ1_METPB
hypothetical protein
Uncharacterized protein-like protein {ECO:0000313|EMBL:ACB82047.1}; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
Montesol18-Sp2_coassembly_scaffold_455731_7
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3982..4581)
-----------------
DNA (600bp)
protein (200aa)
RNA polymerase sigma factor, sigma-24 n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R614_CUPTR
RNA polymerase sigma factor, sigma-24
RNA polymerase sigma factor, sigma-24 {ECO:0000313|EMBL:CAQ70339.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
Montesol18-Sp2_coassembly_scaffold_455731_8
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4578..5483)
-----------------
DNA (906bp)
protein (302aa)
peroxisomal NADH pyrophosphatase (EC:3.6.1.22)
Peroxisomal NADH pyrophosphatase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IPC2_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:KGM33225.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
Montesol18-Sp2_coassembly_scaffold_455731_9
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5712..7526
-----------------
DNA (1815bp)
protein (605aa)
dnaX; DNA polymerase III/DNA elongation factor III, tau and gamma subunits (EC:2.7.7.7)
DNA-directed DNA polymerase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TY23_9PROT
DNA-directed DNA polymerase {ECO:0000313|EMBL:CAM75530.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
Montesol18-Sp2_coassembly_scaffold_455731_10
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7526..7849
-----------------
DNA (324bp)
protein (108aa)
Nucleoid-associated protein C882_2602 n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HQG3_9PROT
Nucleoid-associated protein C882_2602 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_455731_11
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7863..8456
-----------------
DNA (594bp)
protein (198aa)
Recombination protein RecR n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IPI9_RHOCS
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
recR; recombination protein RecR
Montesol18-Sp2_coassembly_scaffold_455731_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8549..9430
-----------------
DNA (882bp)
protein (294aa)
Permease of the drug/metabolite transporter (DMT) superfamily n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ80_9RHIZ
Permease of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:EYR81946.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative transmembrane protein
Montesol18-Sp2_coassembly_scaffold_455731_13
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9440..10528)
-----------------
DNA (1089bp)
protein (363aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F8E5_9PROT
conserved exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CDL00736.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Montesol18-Sp2_coassembly_scaffold_455731_14
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10536..11279)
-----------------
DNA (744bp)
protein (248aa)
ABC transporter n=1 Tax=Oceanibaculum indicum P24 RepID=K2K155_9PROT
ABC transporter {ECO:0000313|EMBL:EKE76549.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
ABC transporter
Montesol18-Sp2_coassembly_scaffold_455731_15
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11292..11963)
-----------------
DNA (672bp)
protein (224aa)
ABC transporter n=1 Tax=Oceanibaculum indicum P24 RepID=K2JMJ4_9PROT
ABC transporter {ECO:0000313|EMBL:EKE76548.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
nitrate ABC transporter permease
Montesol18-Sp2_coassembly_scaffold_455731_16
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11972..12784)
-----------------
DNA (813bp)
protein (271aa)
ABC transporter n=1 Tax=Oceanibaculum indicum P24 RepID=K2JPU3_9PROT
ABC transporter {ECO:0000313|EMBL:EKE76547.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
putative ABC transporter (ATP binding protein)
Montesol18-Sp2_coassembly_scaffold_455731_17
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12810..13559)
-----------------
DNA (750bp)
protein (250aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000376BC6A
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein {ECO:0000313|EMBL:EKE76546.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
bacterial periplasmic substrate-binding protein
Displaying 17 items

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